Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ALPK3Q96L96 SLC25A1P2-201ENST00000430693 912 ntBASIC21.7■■□□□ 1.06
ALPK3Q96L96 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
ALPK3Q96L96 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.7■■□□□ 1.06
ALPK3Q96L96 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.7■■□□□ 1.06
ALPK3Q96L96 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ALPK3Q96L96 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ALPK3Q96L96 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ALPK3Q96L96 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ALPK3Q96L96 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ALPK3Q96L96 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ALPK3Q96L96 AL022342.1-201ENST00000400363 863 ntBASIC21.69■■□□□ 1.06
ALPK3Q96L96 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.69■■□□□ 1.06
ALPK3Q96L96 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ALPK3Q96L96 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
ALPK3Q96L96 AC006538.3-201ENST00000612495 578 ntBASIC21.69■■□□□ 1.06
ALPK3Q96L96 BCL10-202ENST00000620248 774 ntTSL 5 BASIC21.69■■□□□ 1.06
ALPK3Q96L96 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ALPK3Q96L96 AC011484.1-201ENST00000377652 1995 ntBASIC21.69■■□□□ 1.06
ALPK3Q96L96 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ALPK3Q96L96 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ALPK3Q96L96 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.69■■□□□ 1.06
ALPK3Q96L96 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ALPK3Q96L96 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.69■■□□□ 1.06
ALPK3Q96L96 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ALPK3Q96L96 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.69■■□□□ 1.06
ALPK3Q96L96 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ALPK3Q96L96 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.68■■□□□ 1.06
ALPK3Q96L96 AC008040.2-201ENST00000461049 708 ntBASIC21.68■■□□□ 1.06
ALPK3Q96L96 PRSS44-201ENST00000515154 1146 ntBASIC21.68■■□□□ 1.06
ALPK3Q96L96 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.68■■□□□ 1.06
ALPK3Q96L96 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC21.68■■□□□ 1.06
ALPK3Q96L96 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ALPK3Q96L96 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
ALPK3Q96L96 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.68■■□□□ 1.06
ALPK3Q96L96 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ALPK3Q96L96 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ALPK3Q96L96 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.68■■□□□ 1.06
ALPK3Q96L96 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.68■■□□□ 1.06
ALPK3Q96L96 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ALPK3Q96L96 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.68■■□□□ 1.06
ALPK3Q96L96 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ALPK3Q96L96 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.68■■□□□ 1.06
ALPK3Q96L96 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.68■■□□□ 1.06
ALPK3Q96L96 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.68■■□□□ 1.06
ALPK3Q96L96 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ALPK3Q96L96 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.67■■□□□ 1.06
ALPK3Q96L96 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.67■■□□□ 1.06
ALPK3Q96L96 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
ALPK3Q96L96 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ALPK3Q96L96 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
ALPK3Q96L96 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
ALPK3Q96L96 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
ALPK3Q96L96 AC004870.1-201ENST00000315132 882 ntBASIC21.67■■□□□ 1.06
ALPK3Q96L96 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ALPK3Q96L96 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC21.67■■□□□ 1.06
ALPK3Q96L96 SPDYE15P-201ENST00000424157 909 ntBASIC21.67■■□□□ 1.06
ALPK3Q96L96 SKP2-204ENST00000508514 821 ntTSL 3 BASIC21.67■■□□□ 1.06
ALPK3Q96L96 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ALPK3Q96L96 PRELID1P1-202ENST00000567272 903 ntBASIC21.67■■□□□ 1.06
ALPK3Q96L96 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ALPK3Q96L96 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.67■■□□□ 1.06
ALPK3Q96L96 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.67■■□□□ 1.06
ALPK3Q96L96 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ALPK3Q96L96 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ALPK3Q96L96 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ALPK3Q96L96 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ALPK3Q96L96 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
ALPK3Q96L96 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.67■■□□□ 1.06
ALPK3Q96L96 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.67■■□□□ 1.06
ALPK3Q96L96 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.67■■□□□ 1.06
ALPK3Q96L96 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.67■■□□□ 1.06
ALPK3Q96L96 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ALPK3Q96L96 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ALPK3Q96L96 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.67■■□□□ 1.06
ALPK3Q96L96 AP003041.3-201ENST00000527151 707 ntBASIC21.67■■□□□ 1.06
ALPK3Q96L96 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.67■■□□□ 1.06
ALPK3Q96L96 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC21.67■■□□□ 1.06
ALPK3Q96L96 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.67■■□□□ 1.06
ALPK3Q96L96 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
ALPK3Q96L96 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
ALPK3Q96L96 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC21.66■■□□□ 1.06
ALPK3Q96L96 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ALPK3Q96L96 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ALPK3Q96L96 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.66■■□□□ 1.06
ALPK3Q96L96 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ALPK3Q96L96 STARP1-201ENST00000397973 869 ntBASIC21.66■■□□□ 1.06
ALPK3Q96L96 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC21.66■■□□□ 1.06
ALPK3Q96L96 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.66■■□□□ 1.06
ALPK3Q96L96 MIR3180-1-201ENST00000580374 94 ntBASIC21.66■■□□□ 1.06
ALPK3Q96L96 MIR3180-3-201ENST00000584616 94 ntBASIC21.66■■□□□ 1.06
ALPK3Q96L96 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC21.66■■□□□ 1.06
ALPK3Q96L96 AL031008.1-201ENST00000619963 541 ntBASIC21.66■■□□□ 1.06
ALPK3Q96L96 HLA-A-209ENST00000638375 975 ntBASIC21.66■■□□□ 1.06
ALPK3Q96L96 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ALPK3Q96L96 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ALPK3Q96L96 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.65■■□□□ 1.06
ALPK3Q96L96 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ALPK3Q96L96 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
ALPK3Q96L96 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms