Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.26■□□□□ 0.67
VPS50Q96JG6 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.26■□□□□ 0.67
VPS50Q96JG6 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.26■□□□□ 0.67
VPS50Q96JG6 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.26■□□□□ 0.67
VPS50Q96JG6 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.26■□□□□ 0.67
VPS50Q96JG6 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.26■□□□□ 0.67
VPS50Q96JG6 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
VPS50Q96JG6 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS50Q96JG6 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS50Q96JG6 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
VPS50Q96JG6 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VPS50Q96JG6 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VPS50Q96JG6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
VPS50Q96JG6 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.26■□□□□ 0.67
VPS50Q96JG6 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS50Q96JG6 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VPS50Q96JG6 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VPS50Q96JG6 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS50Q96JG6 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.25■□□□□ 0.67
VPS50Q96JG6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS50Q96JG6 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
VPS50Q96JG6 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS50Q96JG6 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS50Q96JG6 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
VPS50Q96JG6 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
VPS50Q96JG6 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
VPS50Q96JG6 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS50Q96JG6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.25■□□□□ 0.67
VPS50Q96JG6 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
VPS50Q96JG6 AC083880.1-201ENST00000608266 535 ntBASIC19.25■□□□□ 0.67
VPS50Q96JG6 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.25■□□□□ 0.67
VPS50Q96JG6 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS50Q96JG6 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.25■□□□□ 0.67
VPS50Q96JG6 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
VPS50Q96JG6 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
VPS50Q96JG6 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.25■□□□□ 0.67
VPS50Q96JG6 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS50Q96JG6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VPS50Q96JG6 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS50Q96JG6 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.25■□□□□ 0.67
VPS50Q96JG6 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS50Q96JG6 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS50Q96JG6 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.24■□□□□ 0.67
VPS50Q96JG6 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.24■□□□□ 0.67
VPS50Q96JG6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
VPS50Q96JG6 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
VPS50Q96JG6 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS50Q96JG6 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS50Q96JG6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VPS50Q96JG6 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VPS50Q96JG6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VPS50Q96JG6 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS50Q96JG6 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.24■□□□□ 0.67
VPS50Q96JG6 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.24■□□□□ 0.67
VPS50Q96JG6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.24■□□□□ 0.67
VPS50Q96JG6 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.24■□□□□ 0.67
VPS50Q96JG6 ITM2C-210ENST00000620962 501 ntBASIC19.24■□□□□ 0.67
VPS50Q96JG6 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS50Q96JG6 AC116562.4-201ENST00000641316 2276 ntBASIC19.24■□□□□ 0.67
VPS50Q96JG6 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS50Q96JG6 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS50Q96JG6 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS50Q96JG6 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS50Q96JG6 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.24■□□□□ 0.67
VPS50Q96JG6 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VPS50Q96JG6 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.24■□□□□ 0.67
VPS50Q96JG6 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS50Q96JG6 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.24■□□□□ 0.67
VPS50Q96JG6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.24■□□□□ 0.67
VPS50Q96JG6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
VPS50Q96JG6 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VPS50Q96JG6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
VPS50Q96JG6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.23■□□□□ 0.67
VPS50Q96JG6 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS50Q96JG6 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS50Q96JG6 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS50Q96JG6 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS50Q96JG6 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS50Q96JG6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.23■□□□□ 0.67
VPS50Q96JG6 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.23■□□□□ 0.67
VPS50Q96JG6 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.23■□□□□ 0.67
VPS50Q96JG6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.23■□□□□ 0.67
VPS50Q96JG6 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.23■□□□□ 0.67
VPS50Q96JG6 MIR4651-201ENST00000582622 73 ntBASIC19.23■□□□□ 0.67
VPS50Q96JG6 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS50Q96JG6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.23■□□□□ 0.67
VPS50Q96JG6 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS50Q96JG6 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS50Q96JG6 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS50Q96JG6 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS50Q96JG6 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.23■□□□□ 0.67
VPS50Q96JG6 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS50Q96JG6 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS50Q96JG6 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.23■□□□□ 0.67
VPS50Q96JG6 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.23■□□□□ 0.67
VPS50Q96JG6 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VPS50Q96JG6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VPS50Q96JG6 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.22■□□□□ 0.67
VPS50Q96JG6 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VPS50Q96JG6 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms