Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
PDLIM5Q96HC4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDLIM5Q96HC4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PDLIM5Q96HC4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
PDLIM5Q96HC4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDLIM5Q96HC4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.32■□□□□ 0.68
PDLIM5Q96HC4 AC092368.3-202ENST00000574180 1591 ntBASIC19.32■□□□□ 0.68
PDLIM5Q96HC4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
PDLIM5Q96HC4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.32■□□□□ 0.68
PDLIM5Q96HC4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDLIM5Q96HC4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDLIM5Q96HC4 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.32■□□□□ 0.68
PDLIM5Q96HC4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PDLIM5Q96HC4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.32■□□□□ 0.68
PDLIM5Q96HC4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.32■□□□□ 0.68
PDLIM5Q96HC4 AC090192.1-201ENST00000517740 490 ntBASIC19.32■□□□□ 0.68
PDLIM5Q96HC4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PDLIM5Q96HC4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.32■□□□□ 0.68
PDLIM5Q96HC4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.32■□□□□ 0.68
PDLIM5Q96HC4 AC104771.1-201ENST00000603335 964 ntBASIC19.32■□□□□ 0.68
PDLIM5Q96HC4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.32■□□□□ 0.68
PDLIM5Q96HC4 AC083880.1-201ENST00000608266 535 ntBASIC19.32■□□□□ 0.68
PDLIM5Q96HC4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDLIM5Q96HC4 AC116562.4-201ENST00000641316 2276 ntBASIC19.32■□□□□ 0.68
PDLIM5Q96HC4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.32■□□□□ 0.68
PDLIM5Q96HC4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.32■□□□□ 0.68
PDLIM5Q96HC4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDLIM5Q96HC4 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDLIM5Q96HC4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.31■□□□□ 0.68
PDLIM5Q96HC4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDLIM5Q96HC4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.31■□□□□ 0.68
PDLIM5Q96HC4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDLIM5Q96HC4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PDLIM5Q96HC4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDLIM5Q96HC4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.31■□□□□ 0.68
PDLIM5Q96HC4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDLIM5Q96HC4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDLIM5Q96HC4 AC069152.1-201ENST00000438030 544 ntBASIC19.31■□□□□ 0.68
PDLIM5Q96HC4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
PDLIM5Q96HC4 AC006557.6-201ENST00000623071 864 ntBASIC19.31■□□□□ 0.68
PDLIM5Q96HC4 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PDLIM5Q96HC4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PDLIM5Q96HC4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDLIM5Q96HC4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.31■□□□□ 0.68
PDLIM5Q96HC4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
PDLIM5Q96HC4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDLIM5Q96HC4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
PDLIM5Q96HC4 AC093484.2-201ENST00000580996 2166 ntBASIC19.3■□□□□ 0.68
PDLIM5Q96HC4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDLIM5Q96HC4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDLIM5Q96HC4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDLIM5Q96HC4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PDLIM5Q96HC4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDLIM5Q96HC4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDLIM5Q96HC4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.3■□□□□ 0.68
PDLIM5Q96HC4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.3■□□□□ 0.68
PDLIM5Q96HC4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.3■□□□□ 0.68
PDLIM5Q96HC4 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.3■□□□□ 0.68
PDLIM5Q96HC4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.3■□□□□ 0.68
PDLIM5Q96HC4 PNMA6B-201ENST00000538162 1200 ntBASIC19.3■□□□□ 0.68
PDLIM5Q96HC4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.3■□□□□ 0.68
PDLIM5Q96HC4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.3■□□□□ 0.68
PDLIM5Q96HC4 AC098934.4-201ENST00000564127 592 ntBASIC19.3■□□□□ 0.68
PDLIM5Q96HC4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDLIM5Q96HC4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDLIM5Q96HC4 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDLIM5Q96HC4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDLIM5Q96HC4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDLIM5Q96HC4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDLIM5Q96HC4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDLIM5Q96HC4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDLIM5Q96HC4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PDLIM5Q96HC4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDLIM5Q96HC4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDLIM5Q96HC4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDLIM5Q96HC4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDLIM5Q96HC4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.29■□□□□ 0.68
PDLIM5Q96HC4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDLIM5Q96HC4 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDLIM5Q96HC4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.29■□□□□ 0.68
PDLIM5Q96HC4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.29■□□□□ 0.68
PDLIM5Q96HC4 RPS2P52-201ENST00000469610 820 ntBASIC19.29■□□□□ 0.68
PDLIM5Q96HC4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PDLIM5Q96HC4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDLIM5Q96HC4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PDLIM5Q96HC4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.29■□□□□ 0.68
PDLIM5Q96HC4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDLIM5Q96HC4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDLIM5Q96HC4 AC005332.7-201ENST00000614046 2005 ntBASIC19.29■□□□□ 0.68
PDLIM5Q96HC4 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDLIM5Q96HC4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.28■□□□□ 0.68
PDLIM5Q96HC4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDLIM5Q96HC4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PDLIM5Q96HC4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDLIM5Q96HC4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.28■□□□□ 0.68
PDLIM5Q96HC4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.28■□□□□ 0.68
PDLIM5Q96HC4 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDLIM5Q96HC4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PDLIM5Q96HC4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDLIM5Q96HC4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms