Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.86■□□□□ 0.77
CHMP6Q96FZ7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP6Q96FZ7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP6Q96FZ7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP6Q96FZ7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.86■□□□□ 0.77
CHMP6Q96FZ7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP6Q96FZ7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP6Q96FZ7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP6Q96FZ7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP6Q96FZ7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
CHMP6Q96FZ7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP6Q96FZ7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP6Q96FZ7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.86■□□□□ 0.77
CHMP6Q96FZ7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.86■□□□□ 0.77
CHMP6Q96FZ7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.86■□□□□ 0.77
CHMP6Q96FZ7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP6Q96FZ7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP6Q96FZ7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CHMP6Q96FZ7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP6Q96FZ7 AC018470.1-201ENST00000624790 3129 ntBASIC19.86■□□□□ 0.77
CHMP6Q96FZ7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP6Q96FZ7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.86■□□□□ 0.77
CHMP6Q96FZ7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CHMP6Q96FZ7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP6Q96FZ7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP6Q96FZ7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP6Q96FZ7 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CHMP6Q96FZ7 KRT8P36-201ENST00000489121 1440 ntBASIC19.85■□□□□ 0.77
CHMP6Q96FZ7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CHMP6Q96FZ7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.85■□□□□ 0.77
CHMP6Q96FZ7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP6Q96FZ7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP6Q96FZ7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CHMP6Q96FZ7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.85■□□□□ 0.77
CHMP6Q96FZ7 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP6Q96FZ7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.85■□□□□ 0.77
CHMP6Q96FZ7 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.85■□□□□ 0.77
CHMP6Q96FZ7 AL136967.2-201ENST00000623968 743 ntBASIC19.85■□□□□ 0.77
CHMP6Q96FZ7 AC135050.7-201ENST00000624508 2218 ntBASIC19.85■□□□□ 0.77
CHMP6Q96FZ7 AC009237.14-201ENST00000609975 1594 ntBASIC19.85■□□□□ 0.77
CHMP6Q96FZ7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP6Q96FZ7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
CHMP6Q96FZ7 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP6Q96FZ7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CHMP6Q96FZ7 AC116050.2-201ENST00000612102 1779 ntBASIC19.85■□□□□ 0.77
CHMP6Q96FZ7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP6Q96FZ7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP6Q96FZ7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.85■□□□□ 0.77
CHMP6Q96FZ7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP6Q96FZ7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.84■□□□□ 0.77
CHMP6Q96FZ7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP6Q96FZ7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP6Q96FZ7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP6Q96FZ7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP6Q96FZ7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CHMP6Q96FZ7 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.84■□□□□ 0.77
CHMP6Q96FZ7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.84■□□□□ 0.77
CHMP6Q96FZ7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP6Q96FZ7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CHMP6Q96FZ7 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP6Q96FZ7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP6Q96FZ7 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP6Q96FZ7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.84■□□□□ 0.77
CHMP6Q96FZ7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP6Q96FZ7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.84■□□□□ 0.77
CHMP6Q96FZ7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP6Q96FZ7 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.84■□□□□ 0.77
CHMP6Q96FZ7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.84■□□□□ 0.77
CHMP6Q96FZ7 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP6Q96FZ7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.84■□□□□ 0.77
CHMP6Q96FZ7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP6Q96FZ7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP6Q96FZ7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.84■□□□□ 0.77
CHMP6Q96FZ7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.84■□□□□ 0.77
CHMP6Q96FZ7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP6Q96FZ7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP6Q96FZ7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.83■□□□□ 0.77
CHMP6Q96FZ7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHMP6Q96FZ7 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHMP6Q96FZ7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.83■□□□□ 0.77
CHMP6Q96FZ7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CHMP6Q96FZ7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.83■□□□□ 0.77
CHMP6Q96FZ7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHMP6Q96FZ7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHMP6Q96FZ7 PCDHB18P-201ENST00000524813 2368 ntBASIC19.83■□□□□ 0.77
CHMP6Q96FZ7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHMP6Q96FZ7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CHMP6Q96FZ7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHMP6Q96FZ7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.83■□□□□ 0.77
CHMP6Q96FZ7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.83■□□□□ 0.77
CHMP6Q96FZ7 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHMP6Q96FZ7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.83■□□□□ 0.76
CHMP6Q96FZ7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CHMP6Q96FZ7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHMP6Q96FZ7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHMP6Q96FZ7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
CHMP6Q96FZ7 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.83■□□□□ 0.76
CHMP6Q96FZ7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.82■□□□□ 0.76
CHMP6Q96FZ7 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.82■□□□□ 0.76
CHMP6Q96FZ7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms