Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
IFT43Q96FT9 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
IFT43Q96FT9 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
IFT43Q96FT9 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
IFT43Q96FT9 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IFT43Q96FT9 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
IFT43Q96FT9 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
IFT43Q96FT9 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
IFT43Q96FT9 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
IFT43Q96FT9 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
IFT43Q96FT9 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
IFT43Q96FT9 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
IFT43Q96FT9 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
IFT43Q96FT9 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
IFT43Q96FT9 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
IFT43Q96FT9 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
IFT43Q96FT9 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.31■□□□□ 0.84
IFT43Q96FT9 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
IFT43Q96FT9 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.31■□□□□ 0.84
IFT43Q96FT9 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.31■□□□□ 0.84
IFT43Q96FT9 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
IFT43Q96FT9 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.31■□□□□ 0.84
IFT43Q96FT9 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.31■□□□□ 0.84
IFT43Q96FT9 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
IFT43Q96FT9 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
IFT43Q96FT9 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
IFT43Q96FT9 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
IFT43Q96FT9 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.31■□□□□ 0.84
IFT43Q96FT9 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
IFT43Q96FT9 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
IFT43Q96FT9 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
IFT43Q96FT9 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
IFT43Q96FT9 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
IFT43Q96FT9 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
IFT43Q96FT9 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
IFT43Q96FT9 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.3■□□□□ 0.84
IFT43Q96FT9 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.3■□□□□ 0.84
IFT43Q96FT9 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
IFT43Q96FT9 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.3■□□□□ 0.84
IFT43Q96FT9 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
IFT43Q96FT9 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.3■□□□□ 0.84
IFT43Q96FT9 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.3■□□□□ 0.84
IFT43Q96FT9 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.3■□□□□ 0.84
IFT43Q96FT9 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
IFT43Q96FT9 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.3■□□□□ 0.84
IFT43Q96FT9 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
IFT43Q96FT9 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
IFT43Q96FT9 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
IFT43Q96FT9 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
IFT43Q96FT9 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
IFT43Q96FT9 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
IFT43Q96FT9 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
IFT43Q96FT9 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
IFT43Q96FT9 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.29■□□□□ 0.84
IFT43Q96FT9 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
IFT43Q96FT9 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.29■□□□□ 0.84
IFT43Q96FT9 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
IFT43Q96FT9 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
IFT43Q96FT9 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
IFT43Q96FT9 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.29■□□□□ 0.84
IFT43Q96FT9 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.29■□□□□ 0.84
IFT43Q96FT9 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
IFT43Q96FT9 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
IFT43Q96FT9 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.29■□□□□ 0.84
IFT43Q96FT9 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.29■□□□□ 0.84
IFT43Q96FT9 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
IFT43Q96FT9 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
IFT43Q96FT9 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
IFT43Q96FT9 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.28■□□□□ 0.84
IFT43Q96FT9 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IFT43Q96FT9 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.28■□□□□ 0.84
IFT43Q96FT9 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
IFT43Q96FT9 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IFT43Q96FT9 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.28■□□□□ 0.84
IFT43Q96FT9 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.28■□□□□ 0.84
IFT43Q96FT9 AC099778.1-201ENST00000568593 1911 ntBASIC20.28■□□□□ 0.84
IFT43Q96FT9 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
IFT43Q96FT9 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IFT43Q96FT9 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IFT43Q96FT9 HLA-G-202ENST00000376815 851 ntBASIC20.28■□□□□ 0.84
IFT43Q96FT9 HLA-G-203ENST00000376818 1127 ntBASIC20.28■□□□□ 0.84
IFT43Q96FT9 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
IFT43Q96FT9 RPS2P52-201ENST00000469610 820 ntBASIC20.28■□□□□ 0.84
IFT43Q96FT9 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.28■□□□□ 0.84
IFT43Q96FT9 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IFT43Q96FT9 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.28■□□□□ 0.84
IFT43Q96FT9 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
IFT43Q96FT9 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.28■□□□□ 0.84
IFT43Q96FT9 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
IFT43Q96FT9 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IFT43Q96FT9 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.28■□□□□ 0.84
IFT43Q96FT9 KRT8P20-201ENST00000423953 1409 ntBASIC20.27■□□□□ 0.84
IFT43Q96FT9 KRT8P17-201ENST00000453110 1448 ntBASIC20.27■□□□□ 0.84
IFT43Q96FT9 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
IFT43Q96FT9 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IFT43Q96FT9 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.27■□□□□ 0.84
IFT43Q96FT9 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IFT43Q96FT9 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IFT43Q96FT9 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.27■□□□□ 0.84
IFT43Q96FT9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms