Protein–RNA interactions for Protein: Q96FI4

NEIL1, Endonuclease 8-like 1, humanhuman

Predicted RBP Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1Q96FI4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NEIL1Q96FI4 KRT8P17-201ENST00000453110 1448 ntBASIC16.65■□□□□ 0.26
NEIL1Q96FI4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NEIL1Q96FI4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NEIL1Q96FI4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
NEIL1Q96FI4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.65■□□□□ 0.26
NEIL1Q96FI4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.65■□□□□ 0.26
NEIL1Q96FI4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NEIL1Q96FI4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.65■□□□□ 0.26
NEIL1Q96FI4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
NEIL1Q96FI4 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
NEIL1Q96FI4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
NEIL1Q96FI4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
NEIL1Q96FI4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.65■□□□□ 0.26
NEIL1Q96FI4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.65■□□□□ 0.26
NEIL1Q96FI4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NEIL1Q96FI4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NEIL1Q96FI4 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
NEIL1Q96FI4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
NEIL1Q96FI4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
NEIL1Q96FI4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEIL1Q96FI4 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.64■□□□□ 0.25
NEIL1Q96FI4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEIL1Q96FI4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEIL1Q96FI4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.64■□□□□ 0.25
NEIL1Q96FI4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
NEIL1Q96FI4 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.64■□□□□ 0.25
NEIL1Q96FI4 AC142381.4-202ENST00000563973 229 ntBASIC16.64■□□□□ 0.25
NEIL1Q96FI4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.64■□□□□ 0.25
NEIL1Q96FI4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.64■□□□□ 0.25
NEIL1Q96FI4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NEIL1Q96FI4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
NEIL1Q96FI4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
NEIL1Q96FI4 GABARAPL3-202ENST00000624044 1851 ntBASIC16.64■□□□□ 0.25
NEIL1Q96FI4 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.64■□□□□ 0.25
NEIL1Q96FI4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEIL1Q96FI4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEIL1Q96FI4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.64■□□□□ 0.25
NEIL1Q96FI4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
NEIL1Q96FI4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.64■□□□□ 0.25
NEIL1Q96FI4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NEIL1Q96FI4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
NEIL1Q96FI4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEIL1Q96FI4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
NEIL1Q96FI4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NEIL1Q96FI4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.64■□□□□ 0.25
NEIL1Q96FI4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.63■□□□□ 0.25
NEIL1Q96FI4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NEIL1Q96FI4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEIL1Q96FI4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NEIL1Q96FI4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.63■□□□□ 0.25
NEIL1Q96FI4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
NEIL1Q96FI4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
NEIL1Q96FI4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NEIL1Q96FI4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEIL1Q96FI4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.63■□□□□ 0.25
NEIL1Q96FI4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.63■□□□□ 0.25
NEIL1Q96FI4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.63■□□□□ 0.25
NEIL1Q96FI4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NEIL1Q96FI4 RPS2P52-201ENST00000469610 820 ntBASIC16.63■□□□□ 0.25
NEIL1Q96FI4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
NEIL1Q96FI4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.63■□□□□ 0.25
NEIL1Q96FI4 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.63■□□□□ 0.25
NEIL1Q96FI4 RN7SL471P-201ENST00000580476 299 ntBASIC16.63■□□□□ 0.25
NEIL1Q96FI4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEIL1Q96FI4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.63■□□□□ 0.25
NEIL1Q96FI4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.63■□□□□ 0.25
NEIL1Q96FI4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.63■□□□□ 0.25
NEIL1Q96FI4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
NEIL1Q96FI4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.63■□□□□ 0.25
NEIL1Q96FI4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NEIL1Q96FI4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
NEIL1Q96FI4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEIL1Q96FI4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEIL1Q96FI4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.62■□□□□ 0.25
NEIL1Q96FI4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEIL1Q96FI4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.62■□□□□ 0.25
NEIL1Q96FI4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.62■□□□□ 0.25
NEIL1Q96FI4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEIL1Q96FI4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEIL1Q96FI4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
NEIL1Q96FI4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NEIL1Q96FI4 GCSHP5-201ENST00000443090 522 ntBASIC16.62■□□□□ 0.25
NEIL1Q96FI4 AL158047.1-201ENST00000445918 881 ntBASIC16.62■□□□□ 0.25
NEIL1Q96FI4 AC098590.1-201ENST00000468126 897 ntBASIC16.62■□□□□ 0.25
NEIL1Q96FI4 C1QBPP2-201ENST00000528754 825 ntBASIC16.62■□□□□ 0.25
NEIL1Q96FI4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
NEIL1Q96FI4 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NEIL1Q96FI4 AC233263.1-201ENST00000578059 224 ntBASIC16.62■□□□□ 0.25
NEIL1Q96FI4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
NEIL1Q96FI4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.62■□□□□ 0.25
NEIL1Q96FI4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.62■□□□□ 0.25
NEIL1Q96FI4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEIL1Q96FI4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEIL1Q96FI4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NEIL1Q96FI4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEIL1Q96FI4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.62■□□□□ 0.25
NEIL1Q96FI4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
NEIL1Q96FI4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEIL1Q96FI4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms