Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
CHCHD1Q96BP2 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC14.39□□□□□ -0.11
CHCHD1Q96BP2 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHCHD1Q96BP2 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHCHD1Q96BP2 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CHCHD1Q96BP2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC14.39□□□□□ -0.11
CHCHD1Q96BP2 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC14.39□□□□□ -0.11
CHCHD1Q96BP2 PVT1_1.1-201ENST00000615125 194 ntBASIC14.39□□□□□ -0.11
CHCHD1Q96BP2 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CHCHD1Q96BP2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHCHD1Q96BP2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHCHD1Q96BP2 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CHCHD1Q96BP2 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CHCHD1Q96BP2 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC14.39□□□□□ -0.11
CHCHD1Q96BP2 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CHCHD1Q96BP2 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHCHD1Q96BP2 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CHCHD1Q96BP2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CHCHD1Q96BP2 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHCHD1Q96BP2 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC14.39□□□□□ -0.11
CHCHD1Q96BP2 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CHCHD1Q96BP2 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC14.39□□□□□ -0.11
CHCHD1Q96BP2 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHCHD1Q96BP2 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.39□□□□□ -0.11
CHCHD1Q96BP2 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CHCHD1Q96BP2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHCHD1Q96BP2 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CHCHD1Q96BP2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CHCHD1Q96BP2 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHCHD1Q96BP2 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC14.38□□□□□ -0.11
CHCHD1Q96BP2 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHCHD1Q96BP2 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.38□□□□□ -0.11
CHCHD1Q96BP2 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CHCHD1Q96BP2 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHCHD1Q96BP2 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC14.38□□□□□ -0.11
CHCHD1Q96BP2 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHCHD1Q96BP2 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHCHD1Q96BP2 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHCHD1Q96BP2 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CHCHD1Q96BP2 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
CHCHD1Q96BP2 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHCHD1Q96BP2 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CHCHD1Q96BP2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHCHD1Q96BP2 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHCHD1Q96BP2 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHCHD1Q96BP2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CHCHD1Q96BP2 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC14.38□□□□□ -0.11
CHCHD1Q96BP2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC14.38□□□□□ -0.11
CHCHD1Q96BP2 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHCHD1Q96BP2 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHCHD1Q96BP2 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHCHD1Q96BP2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHCHD1Q96BP2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHCHD1Q96BP2 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHCHD1Q96BP2 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHCHD1Q96BP2 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHCHD1Q96BP2 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHCHD1Q96BP2 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CHCHD1Q96BP2 MOK-225ENST00000522867 1883 ntTSL 5 BASIC14.38□□□□□ -0.11
CHCHD1Q96BP2 AP004607.4-201ENST00000530158 1459 ntBASIC14.38□□□□□ -0.11
CHCHD1Q96BP2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CHCHD1Q96BP2 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHCHD1Q96BP2 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
CHCHD1Q96BP2 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC14.37□□□□□ -0.11
CHCHD1Q96BP2 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHCHD1Q96BP2 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHCHD1Q96BP2 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHCHD1Q96BP2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC14.37□□□□□ -0.11
CHCHD1Q96BP2 AC006333.2-201ENST00000607957 2099 ntBASIC14.37□□□□□ -0.11
CHCHD1Q96BP2 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHCHD1Q96BP2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHCHD1Q96BP2 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHCHD1Q96BP2 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHCHD1Q96BP2 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHCHD1Q96BP2 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
CHCHD1Q96BP2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHCHD1Q96BP2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHCHD1Q96BP2 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.37□□□□□ -0.11
CHCHD1Q96BP2 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHCHD1Q96BP2 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC14.37□□□□□ -0.11
CHCHD1Q96BP2 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHCHD1Q96BP2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC14.37□□□□□ -0.11
CHCHD1Q96BP2 DUX4L18-201ENST00000553347 1267 ntBASIC14.37□□□□□ -0.11
CHCHD1Q96BP2 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC14.37□□□□□ -0.11
CHCHD1Q96BP2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC14.37□□□□□ -0.11
CHCHD1Q96BP2 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHCHD1Q96BP2 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CHCHD1Q96BP2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHCHD1Q96BP2 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
CHCHD1Q96BP2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHCHD1Q96BP2 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHCHD1Q96BP2 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.37□□□□□ -0.11
CHCHD1Q96BP2 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CHCHD1Q96BP2 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHCHD1Q96BP2 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHCHD1Q96BP2 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHCHD1Q96BP2 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHCHD1Q96BP2 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHCHD1Q96BP2 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CHCHD1Q96BP2 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms