Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.33■□□□□ 0.37
RAB40AQ8WXH6 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
RAB40AQ8WXH6 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RAB40AQ8WXH6 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB40AQ8WXH6 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB40AQ8WXH6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.33■□□□□ 0.36
RAB40AQ8WXH6 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB40AQ8WXH6 GPX1P1-201ENST00000388829 606 ntBASIC17.33■□□□□ 0.36
RAB40AQ8WXH6 CNN2P6-201ENST00000439038 900 ntBASIC17.33■□□□□ 0.36
RAB40AQ8WXH6 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.33■□□□□ 0.36
RAB40AQ8WXH6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.33■□□□□ 0.36
RAB40AQ8WXH6 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.33■□□□□ 0.36
RAB40AQ8WXH6 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
RAB40AQ8WXH6 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB40AQ8WXH6 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB40AQ8WXH6 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
RAB40AQ8WXH6 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.33■□□□□ 0.36
RAB40AQ8WXH6 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
RAB40AQ8WXH6 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB40AQ8WXH6 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAB40AQ8WXH6 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB40AQ8WXH6 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB40AQ8WXH6 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.33■□□□□ 0.36
RAB40AQ8WXH6 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB40AQ8WXH6 DPP3P2-201ENST00000416030 1696 ntBASIC17.32■□□□□ 0.36
RAB40AQ8WXH6 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.32■□□□□ 0.36
RAB40AQ8WXH6 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RAB40AQ8WXH6 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB40AQ8WXH6 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB40AQ8WXH6 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.32■□□□□ 0.36
RAB40AQ8WXH6 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.32■□□□□ 0.36
RAB40AQ8WXH6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.32■□□□□ 0.36
RAB40AQ8WXH6 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
RAB40AQ8WXH6 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB40AQ8WXH6 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB40AQ8WXH6 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RAB40AQ8WXH6 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB40AQ8WXH6 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.32■□□□□ 0.36
RAB40AQ8WXH6 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.32■□□□□ 0.36
RAB40AQ8WXH6 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.32■□□□□ 0.36
RAB40AQ8WXH6 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.32■□□□□ 0.36
RAB40AQ8WXH6 AL121832.2-201ENST00000610979 668 ntBASIC17.32■□□□□ 0.36
RAB40AQ8WXH6 AL109923.1-201ENST00000618799 583 ntBASIC17.32■□□□□ 0.36
RAB40AQ8WXH6 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RAB40AQ8WXH6 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB40AQ8WXH6 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.32■□□□□ 0.36
RAB40AQ8WXH6 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.32■□□□□ 0.36
RAB40AQ8WXH6 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB40AQ8WXH6 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB40AQ8WXH6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB40AQ8WXH6 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40AQ8WXH6 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40AQ8WXH6 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40AQ8WXH6 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40AQ8WXH6 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40AQ8WXH6 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40AQ8WXH6 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40AQ8WXH6 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40AQ8WXH6 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RAB40AQ8WXH6 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40AQ8WXH6 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40AQ8WXH6 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40AQ8WXH6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.31■□□□□ 0.36
RAB40AQ8WXH6 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.31■□□□□ 0.36
RAB40AQ8WXH6 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.31■□□□□ 0.36
RAB40AQ8WXH6 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.31■□□□□ 0.36
RAB40AQ8WXH6 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40AQ8WXH6 AC104771.1-201ENST00000603335 964 ntBASIC17.31■□□□□ 0.36
RAB40AQ8WXH6 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.31■□□□□ 0.36
RAB40AQ8WXH6 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.31■□□□□ 0.36
RAB40AQ8WXH6 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40AQ8WXH6 AC093503.3-201ENST00000624917 2352 ntBASIC17.31■□□□□ 0.36
RAB40AQ8WXH6 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40AQ8WXH6 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
RAB40AQ8WXH6 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40AQ8WXH6 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40AQ8WXH6 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40AQ8WXH6 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RAB40AQ8WXH6 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB40AQ8WXH6 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.3■□□□□ 0.36
RAB40AQ8WXH6 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RAB40AQ8WXH6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB40AQ8WXH6 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RAB40AQ8WXH6 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RAB40AQ8WXH6 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB40AQ8WXH6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
RAB40AQ8WXH6 AC007322.4-201ENST00000509611 723 ntBASIC17.3■□□□□ 0.36
RAB40AQ8WXH6 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB40AQ8WXH6 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB40AQ8WXH6 AL050303.2-201ENST00000619798 666 ntBASIC17.3■□□□□ 0.36
RAB40AQ8WXH6 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RAB40AQ8WXH6 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
RAB40AQ8WXH6 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB40AQ8WXH6 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB40AQ8WXH6 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RAB40AQ8WXH6 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB40AQ8WXH6 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB40AQ8WXH6 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.3■□□□□ 0.36
RAB40AQ8WXH6 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB40AQ8WXH6 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms