Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 TOB2P1-201ENST00000469761 992 ntBASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SYNE2Q8WXH0 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 DNAJB3-201ENST00000446806 729 ntBASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 YBX1P10-201ENST00000444752 975 ntBASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 SNHG9-202ENST00000564014 471 ntBASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 AL049840.3-201ENST00000602669 611 ntBASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 TAF8-206ENST00000472818 719 ntTSL 2 BASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 PNN-205ENST00000556530 601 ntTSL 2 BASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 CIB2-208ENST00000560618 804 ntTSL 2 BASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 CYGB-204ENST00000589342 815 ntTSL 3 BASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 KSR1P1-201ENST00000446298 240 ntBASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 MPI-205ENST00000562606 1052 ntTSL 3 BASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SYNE2Q8WXH0 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.12
SYNE2Q8WXH0 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.12
SYNE2Q8WXH0 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
SYNE2Q8WXH0 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC8.09□□□□□ -1.12
SYNE2Q8WXH0 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.12
SYNE2Q8WXH0 AC091799.1-201ENST00000422823 811 ntBASIC8.09□□□□□ -1.12
SYNE2Q8WXH0 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC8.09□□□□□ -1.12
SYNE2Q8WXH0 GXYLT1P6-201ENST00000456472 1187 ntBASIC8.09□□□□□ -1.12
SYNE2Q8WXH0 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC8.09□□□□□ -1.12
SYNE2Q8WXH0 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.12
SYNE2Q8WXH0 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 CYP21A1P-202ENST00000354927 1481 ntBASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 IMP4-203ENST00000409935 958 ntTSL 5 BASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 ATP5G2P4-201ENST00000442175 420 ntBASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 AC138894.3-201ENST00000603787 634 ntBASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 AL162741.1-201ENST00000565563 1558 ntBASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 AC116407.3-201ENST00000623905 1129 ntBASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SYNE2Q8WXH0 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms