Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
STAG1Q8WVM7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC23.33■■□□□ 1.33
STAG1Q8WVM7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
STAG1Q8WVM7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC23.33■■□□□ 1.33
STAG1Q8WVM7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC23.33■■□□□ 1.33
STAG1Q8WVM7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
STAG1Q8WVM7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
STAG1Q8WVM7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
STAG1Q8WVM7 NBPF21P-201ENST00000425093 1451 ntBASIC23.33■■□□□ 1.33
STAG1Q8WVM7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
STAG1Q8WVM7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
STAG1Q8WVM7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
STAG1Q8WVM7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
STAG1Q8WVM7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC23.33■■□□□ 1.33
STAG1Q8WVM7 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
STAG1Q8WVM7 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
STAG1Q8WVM7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
STAG1Q8WVM7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
STAG1Q8WVM7 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC23.33■■□□□ 1.33
STAG1Q8WVM7 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
STAG1Q8WVM7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC23.33■■□□□ 1.32
STAG1Q8WVM7 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
STAG1Q8WVM7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC23.33■■□□□ 1.32
STAG1Q8WVM7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
STAG1Q8WVM7 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC23.33■■□□□ 1.32
STAG1Q8WVM7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
STAG1Q8WVM7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
STAG1Q8WVM7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC23.32■■□□□ 1.32
STAG1Q8WVM7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC23.32■■□□□ 1.32
STAG1Q8WVM7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC23.32■■□□□ 1.32
STAG1Q8WVM7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
STAG1Q8WVM7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC23.32■■□□□ 1.32
STAG1Q8WVM7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC23.32■■□□□ 1.32
STAG1Q8WVM7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
STAG1Q8WVM7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC23.32■■□□□ 1.32
STAG1Q8WVM7 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC23.32■■□□□ 1.32
STAG1Q8WVM7 AL596275.1-201ENST00000423464 877 ntBASIC23.32■■□□□ 1.32
STAG1Q8WVM7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC23.32■■□□□ 1.32
STAG1Q8WVM7 AC110285.5-201ENST00000611501 352 ntBASIC23.32■■□□□ 1.32
STAG1Q8WVM7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC23.32■■□□□ 1.32
STAG1Q8WVM7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
STAG1Q8WVM7 TMEM179-206ENST00000616017 1645 ntBASIC23.32■■□□□ 1.32
STAG1Q8WVM7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
STAG1Q8WVM7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
STAG1Q8WVM7 AP006587.1-201ENST00000534129 1502 ntBASIC23.32■■□□□ 1.32
STAG1Q8WVM7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
STAG1Q8WVM7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
STAG1Q8WVM7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
STAG1Q8WVM7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
STAG1Q8WVM7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
STAG1Q8WVM7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC23.31■■□□□ 1.32
STAG1Q8WVM7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC23.31■■□□□ 1.32
STAG1Q8WVM7 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
STAG1Q8WVM7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC23.31■■□□□ 1.32
STAG1Q8WVM7 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
STAG1Q8WVM7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
STAG1Q8WVM7 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC23.31■■□□□ 1.32
STAG1Q8WVM7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC23.31■■□□□ 1.32
STAG1Q8WVM7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC23.31■■□□□ 1.32
STAG1Q8WVM7 LBX2-AS1-202ENST00000603175 2083 ntBASIC23.31■■□□□ 1.32
STAG1Q8WVM7 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
STAG1Q8WVM7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
STAG1Q8WVM7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC23.3■■□□□ 1.32
STAG1Q8WVM7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
STAG1Q8WVM7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
STAG1Q8WVM7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
STAG1Q8WVM7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
STAG1Q8WVM7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
STAG1Q8WVM7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC23.3■■□□□ 1.32
STAG1Q8WVM7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC23.3■■□□□ 1.32
STAG1Q8WVM7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
STAG1Q8WVM7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
STAG1Q8WVM7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
STAG1Q8WVM7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC23.3■■□□□ 1.32
STAG1Q8WVM7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
STAG1Q8WVM7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC23.3■■□□□ 1.32
STAG1Q8WVM7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC23.3■■□□□ 1.32
STAG1Q8WVM7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
STAG1Q8WVM7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
STAG1Q8WVM7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
STAG1Q8WVM7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
STAG1Q8WVM7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
STAG1Q8WVM7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
STAG1Q8WVM7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
STAG1Q8WVM7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
STAG1Q8WVM7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC23.3■■□□□ 1.32
STAG1Q8WVM7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
STAG1Q8WVM7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
STAG1Q8WVM7 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
STAG1Q8WVM7 YBX1P10-201ENST00000444752 975 ntBASIC23.29■■□□□ 1.32
STAG1Q8WVM7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC23.29■■□□□ 1.32
STAG1Q8WVM7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC23.29■■□□□ 1.32
STAG1Q8WVM7 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC23.29■■□□□ 1.32
STAG1Q8WVM7 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
STAG1Q8WVM7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC23.29■■□□□ 1.32
STAG1Q8WVM7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
STAG1Q8WVM7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
STAG1Q8WVM7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC23.29■■□□□ 1.32
STAG1Q8WVM7 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC23.29■■□□□ 1.32
STAG1Q8WVM7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms