Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DNAAF1Q8NEP3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.35■□□□□ 0.37
DNAAF1Q8NEP3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.35■□□□□ 0.37
DNAAF1Q8NEP3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
DNAAF1Q8NEP3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
DNAAF1Q8NEP3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
DNAAF1Q8NEP3 KRT18P11-201ENST00000435214 1283 ntBASIC17.35■□□□□ 0.37
DNAAF1Q8NEP3 TERF1P5-201ENST00000477545 1207 ntBASIC17.35■□□□□ 0.37
DNAAF1Q8NEP3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.35■□□□□ 0.37
DNAAF1Q8NEP3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.35■□□□□ 0.37
DNAAF1Q8NEP3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
DNAAF1Q8NEP3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.35■□□□□ 0.37
DNAAF1Q8NEP3 AL591742.1-201ENST00000604433 565 ntBASIC17.35■□□□□ 0.37
DNAAF1Q8NEP3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DNAAF1Q8NEP3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DNAAF1Q8NEP3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DNAAF1Q8NEP3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.35■□□□□ 0.37
DNAAF1Q8NEP3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
DNAAF1Q8NEP3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DNAAF1Q8NEP3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.35■□□□□ 0.37
DNAAF1Q8NEP3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DNAAF1Q8NEP3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.35■□□□□ 0.37
DNAAF1Q8NEP3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DNAAF1Q8NEP3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.34■□□□□ 0.37
DNAAF1Q8NEP3 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DNAAF1Q8NEP3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DNAAF1Q8NEP3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
DNAAF1Q8NEP3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
DNAAF1Q8NEP3 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DNAAF1Q8NEP3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
DNAAF1Q8NEP3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DNAAF1Q8NEP3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
DNAAF1Q8NEP3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.34■□□□□ 0.37
DNAAF1Q8NEP3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.34■□□□□ 0.37
DNAAF1Q8NEP3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.34■□□□□ 0.37
DNAAF1Q8NEP3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.34■□□□□ 0.37
DNAAF1Q8NEP3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
DNAAF1Q8NEP3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
DNAAF1Q8NEP3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
DNAAF1Q8NEP3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.34■□□□□ 0.37
DNAAF1Q8NEP3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DNAAF1Q8NEP3 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
DNAAF1Q8NEP3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.34■□□□□ 0.37
DNAAF1Q8NEP3 AC010536.3-201ENST00000620306 533 ntBASIC17.34■□□□□ 0.37
DNAAF1Q8NEP3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
DNAAF1Q8NEP3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
DNAAF1Q8NEP3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DNAAF1Q8NEP3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
DNAAF1Q8NEP3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
DNAAF1Q8NEP3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.33■□□□□ 0.37
DNAAF1Q8NEP3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
DNAAF1Q8NEP3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
DNAAF1Q8NEP3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
DNAAF1Q8NEP3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
DNAAF1Q8NEP3 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
DNAAF1Q8NEP3 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
DNAAF1Q8NEP3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
DNAAF1Q8NEP3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
DNAAF1Q8NEP3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.33■□□□□ 0.37
DNAAF1Q8NEP3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
DNAAF1Q8NEP3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DNAAF1Q8NEP3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
DNAAF1Q8NEP3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
DNAAF1Q8NEP3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DNAAF1Q8NEP3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
DNAAF1Q8NEP3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.33■□□□□ 0.36
DNAAF1Q8NEP3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.33■□□□□ 0.36
DNAAF1Q8NEP3 AC007322.4-201ENST00000509611 723 ntBASIC17.33■□□□□ 0.36
DNAAF1Q8NEP3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.33■□□□□ 0.36
DNAAF1Q8NEP3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.33■□□□□ 0.36
DNAAF1Q8NEP3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
DNAAF1Q8NEP3 MIR6821-201ENST00000617625 74 ntBASIC17.33■□□□□ 0.36
DNAAF1Q8NEP3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
DNAAF1Q8NEP3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DNAAF1Q8NEP3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.33■□□□□ 0.36
DNAAF1Q8NEP3 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
DNAAF1Q8NEP3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
DNAAF1Q8NEP3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.33■□□□□ 0.36
DNAAF1Q8NEP3 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
DNAAF1Q8NEP3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.33■□□□□ 0.36
DNAAF1Q8NEP3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
DNAAF1Q8NEP3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
DNAAF1Q8NEP3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DNAAF1Q8NEP3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DNAAF1Q8NEP3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DNAAF1Q8NEP3 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DNAAF1Q8NEP3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
DNAAF1Q8NEP3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.32■□□□□ 0.36
DNAAF1Q8NEP3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.32■□□□□ 0.36
DNAAF1Q8NEP3 AC087633.2-202ENST00000565166 1439 ntBASIC17.32■□□□□ 0.36
DNAAF1Q8NEP3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DNAAF1Q8NEP3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
DNAAF1Q8NEP3 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DNAAF1Q8NEP3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
DNAAF1Q8NEP3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.32■□□□□ 0.36
DNAAF1Q8NEP3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.32■□□□□ 0.36
DNAAF1Q8NEP3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.32■□□□□ 0.36
DNAAF1Q8NEP3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.32■□□□□ 0.36
DNAAF1Q8NEP3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.32■□□□□ 0.36
DNAAF1Q8NEP3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms