Protein–RNA interactions for Protein: Q8NEK5

ZNF548, Zinc finger protein 548, humanhuman

Predicted RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548Q8NEK5 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF548Q8NEK5 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF548Q8NEK5 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF548Q8NEK5 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF548Q8NEK5 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
ZNF548Q8NEK5 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF548Q8NEK5 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
ZNF548Q8NEK5 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.65■□□□□ 0.74
ZNF548Q8NEK5 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.65■□□□□ 0.74
ZNF548Q8NEK5 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF548Q8NEK5 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF548Q8NEK5 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.65■□□□□ 0.74
ZNF548Q8NEK5 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF548Q8NEK5 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF548Q8NEK5 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.74
ZNF548Q8NEK5 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
ZNF548Q8NEK5 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF548Q8NEK5 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF548Q8NEK5 AC211429.1-201ENST00000415277 523 ntBASIC19.64■□□□□ 0.73
ZNF548Q8NEK5 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.64■□□□□ 0.73
ZNF548Q8NEK5 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.64■□□□□ 0.73
ZNF548Q8NEK5 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.64■□□□□ 0.73
ZNF548Q8NEK5 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.64■□□□□ 0.73
ZNF548Q8NEK5 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
ZNF548Q8NEK5 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.64■□□□□ 0.73
ZNF548Q8NEK5 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF548Q8NEK5 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
ZNF548Q8NEK5 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
ZNF548Q8NEK5 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.64■□□□□ 0.73
ZNF548Q8NEK5 AL121906.2-201ENST00000621597 723 ntBASIC19.64■□□□□ 0.73
ZNF548Q8NEK5 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF548Q8NEK5 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.64■□□□□ 0.73
ZNF548Q8NEK5 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
ZNF548Q8NEK5 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF548Q8NEK5 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF548Q8NEK5 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF548Q8NEK5 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF548Q8NEK5 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF548Q8NEK5 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.64■□□□□ 0.73
ZNF548Q8NEK5 AL391422.3-201ENST00000603791 2761 ntBASIC19.63■□□□□ 0.73
ZNF548Q8NEK5 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF548Q8NEK5 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF548Q8NEK5 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
ZNF548Q8NEK5 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF548Q8NEK5 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF548Q8NEK5 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
ZNF548Q8NEK5 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
ZNF548Q8NEK5 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF548Q8NEK5 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.63■□□□□ 0.73
ZNF548Q8NEK5 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.63■□□□□ 0.73
ZNF548Q8NEK5 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
ZNF548Q8NEK5 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF548Q8NEK5 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF548Q8NEK5 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.63■□□□□ 0.73
ZNF548Q8NEK5 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.63■□□□□ 0.73
ZNF548Q8NEK5 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF548Q8NEK5 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF548Q8NEK5 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF548Q8NEK5 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.63■□□□□ 0.73
ZNF548Q8NEK5 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.63■□□□□ 0.73
ZNF548Q8NEK5 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.63■□□□□ 0.73
ZNF548Q8NEK5 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.63■□□□□ 0.73
ZNF548Q8NEK5 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.63■□□□□ 0.73
ZNF548Q8NEK5 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF548Q8NEK5 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF548Q8NEK5 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.63■□□□□ 0.73
ZNF548Q8NEK5 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
ZNF548Q8NEK5 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.63■□□□□ 0.73
ZNF548Q8NEK5 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ZNF548Q8NEK5 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF548Q8NEK5 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.62■□□□□ 0.73
ZNF548Q8NEK5 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF548Q8NEK5 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.62■□□□□ 0.73
ZNF548Q8NEK5 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF548Q8NEK5 NBPF21P-201ENST00000425093 1451 ntBASIC19.62■□□□□ 0.73
ZNF548Q8NEK5 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF548Q8NEK5 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF548Q8NEK5 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.62■□□□□ 0.73
ZNF548Q8NEK5 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF548Q8NEK5 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF548Q8NEK5 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF548Q8NEK5 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF548Q8NEK5 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.62■□□□□ 0.73
ZNF548Q8NEK5 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.62■□□□□ 0.73
ZNF548Q8NEK5 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.62■□□□□ 0.73
ZNF548Q8NEK5 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.62■□□□□ 0.73
ZNF548Q8NEK5 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF548Q8NEK5 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.62■□□□□ 0.73
ZNF548Q8NEK5 AC007225.1-201ENST00000566331 1836 ntBASIC19.62■□□□□ 0.73
ZNF548Q8NEK5 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF548Q8NEK5 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF548Q8NEK5 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ZNF548Q8NEK5 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF548Q8NEK5 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
ZNF548Q8NEK5 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF548Q8NEK5 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF548Q8NEK5 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.61■□□□□ 0.73
ZNF548Q8NEK5 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF548Q8NEK5 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF548Q8NEK5 AC020907.5-201ENST00000624372 1936 ntBASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms