Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.86■□□□□ 0.61
SRFBP1Q8NEF9 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.86■□□□□ 0.61
SRFBP1Q8NEF9 UNC93B5-201ENST00000530315 699 ntBASIC18.86■□□□□ 0.61
SRFBP1Q8NEF9 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.86■□□□□ 0.61
SRFBP1Q8NEF9 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRFBP1Q8NEF9 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.86■□□□□ 0.61
SRFBP1Q8NEF9 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRFBP1Q8NEF9 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRFBP1Q8NEF9 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRFBP1Q8NEF9 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRFBP1Q8NEF9 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.85■□□□□ 0.61
SRFBP1Q8NEF9 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SRFBP1Q8NEF9 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SRFBP1Q8NEF9 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SRFBP1Q8NEF9 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRFBP1Q8NEF9 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRFBP1Q8NEF9 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.85■□□□□ 0.61
SRFBP1Q8NEF9 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.85■□□□□ 0.61
SRFBP1Q8NEF9 UNC93B4-201ENST00000505679 747 ntBASIC18.85■□□□□ 0.61
SRFBP1Q8NEF9 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.85■□□□□ 0.61
SRFBP1Q8NEF9 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRFBP1Q8NEF9 SOX15-203ENST00000570788 1093 ntBASIC18.85■□□□□ 0.61
SRFBP1Q8NEF9 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.85■□□□□ 0.61
SRFBP1Q8NEF9 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SRFBP1Q8NEF9 AC120498.8-201ENST00000614275 531 ntBASIC18.85■□□□□ 0.61
SRFBP1Q8NEF9 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SRFBP1Q8NEF9 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.85■□□□□ 0.61
SRFBP1Q8NEF9 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRFBP1Q8NEF9 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SRFBP1Q8NEF9 AC116351.2-201ENST00000606540 1585 ntBASIC18.85■□□□□ 0.61
SRFBP1Q8NEF9 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SRFBP1Q8NEF9 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.84■□□□□ 0.61
SRFBP1Q8NEF9 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SRFBP1Q8NEF9 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SRFBP1Q8NEF9 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.84■□□□□ 0.61
SRFBP1Q8NEF9 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SRFBP1Q8NEF9 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.84■□□□□ 0.61
SRFBP1Q8NEF9 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SRFBP1Q8NEF9 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SRFBP1Q8NEF9 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SRFBP1Q8NEF9 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SRFBP1Q8NEF9 RPS2P52-201ENST00000469610 820 ntBASIC18.84■□□□□ 0.61
SRFBP1Q8NEF9 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.84■□□□□ 0.61
SRFBP1Q8NEF9 KRT18P6-201ENST00000555540 1265 ntBASIC18.84■□□□□ 0.61
SRFBP1Q8NEF9 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.84■□□□□ 0.61
SRFBP1Q8NEF9 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SRFBP1Q8NEF9 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.84■□□□□ 0.61
SRFBP1Q8NEF9 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SRFBP1Q8NEF9 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.84■□□□□ 0.61
SRFBP1Q8NEF9 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SRFBP1Q8NEF9 AC008687.6-201ENST00000596318 630 ntBASIC18.84■□□□□ 0.61
SRFBP1Q8NEF9 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.84■□□□□ 0.61
SRFBP1Q8NEF9 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.84■□□□□ 0.61
SRFBP1Q8NEF9 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.84■□□□□ 0.61
SRFBP1Q8NEF9 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.84■□□□□ 0.61
SRFBP1Q8NEF9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.84■□□□□ 0.61
SRFBP1Q8NEF9 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SRFBP1Q8NEF9 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SRFBP1Q8NEF9 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
SRFBP1Q8NEF9 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.83■□□□□ 0.61
SRFBP1Q8NEF9 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.61
SRFBP1Q8NEF9 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.83■□□□□ 0.61
SRFBP1Q8NEF9 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SRFBP1Q8NEF9 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SRFBP1Q8NEF9 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
SRFBP1Q8NEF9 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SRFBP1Q8NEF9 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SRFBP1Q8NEF9 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SRFBP1Q8NEF9 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SRFBP1Q8NEF9 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SRFBP1Q8NEF9 RNA5SP413-201ENST00000516373 109 ntBASIC18.83■□□□□ 0.6
SRFBP1Q8NEF9 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
SRFBP1Q8NEF9 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.83■□□□□ 0.6
SRFBP1Q8NEF9 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SRFBP1Q8NEF9 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.83■□□□□ 0.6
SRFBP1Q8NEF9 AL121906.2-201ENST00000621597 723 ntBASIC18.83■□□□□ 0.6
SRFBP1Q8NEF9 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.83■□□□□ 0.6
SRFBP1Q8NEF9 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.83■□□□□ 0.6
SRFBP1Q8NEF9 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SRFBP1Q8NEF9 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.83■□□□□ 0.6
SRFBP1Q8NEF9 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SRFBP1Q8NEF9 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.82■□□□□ 0.6
SRFBP1Q8NEF9 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SRFBP1Q8NEF9 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.82■□□□□ 0.6
SRFBP1Q8NEF9 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.82■□□□□ 0.6
SRFBP1Q8NEF9 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.82■□□□□ 0.6
SRFBP1Q8NEF9 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.82■□□□□ 0.6
SRFBP1Q8NEF9 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.82■□□□□ 0.6
SRFBP1Q8NEF9 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
SRFBP1Q8NEF9 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.82■□□□□ 0.6
SRFBP1Q8NEF9 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
SRFBP1Q8NEF9 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.82■□□□□ 0.6
SRFBP1Q8NEF9 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SRFBP1Q8NEF9 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.82■□□□□ 0.6
SRFBP1Q8NEF9 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.82■□□□□ 0.6
SRFBP1Q8NEF9 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.82■□□□□ 0.6
SRFBP1Q8NEF9 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.82■□□□□ 0.6
SRFBP1Q8NEF9 AC018553.1-201ENST00000616682 1458 ntBASIC18.82■□□□□ 0.6
SRFBP1Q8NEF9 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SRFBP1Q8NEF9 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms