Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
C3orf56Q8N813 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
C3orf56Q8N813 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC15.46■□□□□ 0.07
C3orf56Q8N813 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
C3orf56Q8N813 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
C3orf56Q8N813 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
C3orf56Q8N813 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC15.46■□□□□ 0.06
C3orf56Q8N813 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
C3orf56Q8N813 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC15.46■□□□□ 0.06
C3orf56Q8N813 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
C3orf56Q8N813 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
C3orf56Q8N813 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
C3orf56Q8N813 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
C3orf56Q8N813 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
C3orf56Q8N813 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
C3orf56Q8N813 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
C3orf56Q8N813 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
C3orf56Q8N813 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
C3orf56Q8N813 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.45■□□□□ 0.06
C3orf56Q8N813 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
C3orf56Q8N813 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
C3orf56Q8N813 MESTP1-201ENST00000404287 994 ntBASIC15.45■□□□□ 0.06
C3orf56Q8N813 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.45■□□□□ 0.06
C3orf56Q8N813 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
C3orf56Q8N813 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.45■□□□□ 0.06
C3orf56Q8N813 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
C3orf56Q8N813 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
C3orf56Q8N813 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
C3orf56Q8N813 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.45■□□□□ 0.06
C3orf56Q8N813 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
C3orf56Q8N813 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
C3orf56Q8N813 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
C3orf56Q8N813 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC15.45■□□□□ 0.06
C3orf56Q8N813 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
C3orf56Q8N813 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
C3orf56Q8N813 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
C3orf56Q8N813 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
C3orf56Q8N813 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC15.44■□□□□ 0.06
C3orf56Q8N813 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC15.44■□□□□ 0.06
C3orf56Q8N813 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
C3orf56Q8N813 AP006587.1-201ENST00000534129 1502 ntBASIC15.44■□□□□ 0.06
C3orf56Q8N813 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
C3orf56Q8N813 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
C3orf56Q8N813 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
C3orf56Q8N813 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
C3orf56Q8N813 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC15.44■□□□□ 0.06
C3orf56Q8N813 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
C3orf56Q8N813 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
C3orf56Q8N813 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
C3orf56Q8N813 INGX-201ENST00000359239 846 ntBASIC15.44■□□□□ 0.06
C3orf56Q8N813 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.44■□□□□ 0.06
C3orf56Q8N813 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.44■□□□□ 0.06
C3orf56Q8N813 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
C3orf56Q8N813 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
C3orf56Q8N813 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.44■□□□□ 0.06
C3orf56Q8N813 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.44■□□□□ 0.06
C3orf56Q8N813 AL031432.5-201ENST00000641059 760 ntBASIC15.44■□□□□ 0.06
C3orf56Q8N813 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
C3orf56Q8N813 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
C3orf56Q8N813 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
C3orf56Q8N813 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
C3orf56Q8N813 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC15.43■□□□□ 0.06
C3orf56Q8N813 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC15.43■□□□□ 0.06
C3orf56Q8N813 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
C3orf56Q8N813 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
C3orf56Q8N813 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.43■□□□□ 0.06
C3orf56Q8N813 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
C3orf56Q8N813 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
C3orf56Q8N813 AC011506.1-201ENST00000474329 610 ntBASIC15.43■□□□□ 0.06
C3orf56Q8N813 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.43■□□□□ 0.06
C3orf56Q8N813 C1QL1P1-201ENST00000568105 661 ntBASIC15.43■□□□□ 0.06
C3orf56Q8N813 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
C3orf56Q8N813 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.43■□□□□ 0.06
C3orf56Q8N813 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.43■□□□□ 0.06
C3orf56Q8N813 ABBA01031674.1-201ENST00000635145 728 ntBASIC15.43■□□□□ 0.06
C3orf56Q8N813 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
C3orf56Q8N813 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
C3orf56Q8N813 AC127496.7-201ENST00000625110 1798 ntBASIC15.43■□□□□ 0.06
C3orf56Q8N813 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
C3orf56Q8N813 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
C3orf56Q8N813 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC15.43■□□□□ 0.06
C3orf56Q8N813 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
C3orf56Q8N813 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
C3orf56Q8N813 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
C3orf56Q8N813 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
C3orf56Q8N813 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
C3orf56Q8N813 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.43■□□□□ 0.06
C3orf56Q8N813 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
C3orf56Q8N813 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
C3orf56Q8N813 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
C3orf56Q8N813 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
C3orf56Q8N813 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
C3orf56Q8N813 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
C3orf56Q8N813 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
C3orf56Q8N813 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
C3orf56Q8N813 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
C3orf56Q8N813 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
C3orf56Q8N813 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
C3orf56Q8N813 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
C3orf56Q8N813 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms