Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PCDH20Q8N6Y1 AP005212.1-201ENST00000581547 1997 ntBASIC20.17■□□□□ 0.82
PCDH20Q8N6Y1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PCDH20Q8N6Y1 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDH20Q8N6Y1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH20Q8N6Y1 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH20Q8N6Y1 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH20Q8N6Y1 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH20Q8N6Y1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH20Q8N6Y1 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.17■□□□□ 0.82
PCDH20Q8N6Y1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDH20Q8N6Y1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.17■□□□□ 0.82
PCDH20Q8N6Y1 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.17■□□□□ 0.82
PCDH20Q8N6Y1 AC124016.1-201ENST00000609552 612 ntBASIC20.17■□□□□ 0.82
PCDH20Q8N6Y1 AP006294.2-201ENST00000641667 209 ntBASIC20.17■□□□□ 0.82
PCDH20Q8N6Y1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDH20Q8N6Y1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH20Q8N6Y1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH20Q8N6Y1 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH20Q8N6Y1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH20Q8N6Y1 AC007952.6-201ENST00000573168 2673 ntBASIC20.17■□□□□ 0.82
PCDH20Q8N6Y1 AC003957.1-201ENST00000625108 2673 ntBASIC20.17■□□□□ 0.82
PCDH20Q8N6Y1 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH20Q8N6Y1 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH20Q8N6Y1 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH20Q8N6Y1 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDH20Q8N6Y1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH20Q8N6Y1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH20Q8N6Y1 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PCDH20Q8N6Y1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH20Q8N6Y1 GABARAPL3-202ENST00000624044 1851 ntBASIC20.16■□□□□ 0.82
PCDH20Q8N6Y1 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDH20Q8N6Y1 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH20Q8N6Y1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.16■□□□□ 0.82
PCDH20Q8N6Y1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PCDH20Q8N6Y1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PCDH20Q8N6Y1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH20Q8N6Y1 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.16■□□□□ 0.82
PCDH20Q8N6Y1 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.16■□□□□ 0.82
PCDH20Q8N6Y1 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH20Q8N6Y1 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH20Q8N6Y1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
PCDH20Q8N6Y1 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH20Q8N6Y1 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.16■□□□□ 0.82
PCDH20Q8N6Y1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH20Q8N6Y1 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH20Q8N6Y1 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDH20Q8N6Y1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PCDH20Q8N6Y1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH20Q8N6Y1 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH20Q8N6Y1 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
PCDH20Q8N6Y1 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH20Q8N6Y1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH20Q8N6Y1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH20Q8N6Y1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH20Q8N6Y1 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.15■□□□□ 0.82
PCDH20Q8N6Y1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDH20Q8N6Y1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH20Q8N6Y1 KRASP1-201ENST00000407852 552 ntBASIC20.15■□□□□ 0.82
PCDH20Q8N6Y1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDH20Q8N6Y1 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH20Q8N6Y1 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.15■□□□□ 0.82
PCDH20Q8N6Y1 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.15■□□□□ 0.82
PCDH20Q8N6Y1 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
PCDH20Q8N6Y1 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.15■□□□□ 0.82
PCDH20Q8N6Y1 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.15■□□□□ 0.82
PCDH20Q8N6Y1 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
PCDH20Q8N6Y1 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
PCDH20Q8N6Y1 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH20Q8N6Y1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.15■□□□□ 0.82
PCDH20Q8N6Y1 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
PCDH20Q8N6Y1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.15■□□□□ 0.82
PCDH20Q8N6Y1 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH20Q8N6Y1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH20Q8N6Y1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDH20Q8N6Y1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH20Q8N6Y1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.15■□□□□ 0.82
PCDH20Q8N6Y1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDH20Q8N6Y1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
PCDH20Q8N6Y1 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.14■□□□□ 0.81
PCDH20Q8N6Y1 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDH20Q8N6Y1 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDH20Q8N6Y1 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDH20Q8N6Y1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDH20Q8N6Y1 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDH20Q8N6Y1 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDH20Q8N6Y1 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDH20Q8N6Y1 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
PCDH20Q8N6Y1 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.14■□□□□ 0.81
PCDH20Q8N6Y1 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDH20Q8N6Y1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDH20Q8N6Y1 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDH20Q8N6Y1 AC110285.5-201ENST00000611501 352 ntBASIC20.14■□□□□ 0.81
PCDH20Q8N6Y1 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDH20Q8N6Y1 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDH20Q8N6Y1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
PCDH20Q8N6Y1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
PCDH20Q8N6Y1 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
PCDH20Q8N6Y1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH20Q8N6Y1 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms