Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
VPS8Q8N3P4 TSPY7P-201ENST00000431358 1114 ntBASIC31.02■■■□□ 2.56
VPS8Q8N3P4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC31.02■■■□□ 2.56
VPS8Q8N3P4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC31.02■■■□□ 2.56
VPS8Q8N3P4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
VPS8Q8N3P4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC31.02■■■□□ 2.56
VPS8Q8N3P4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.56
VPS8Q8N3P4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
VPS8Q8N3P4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC31.01■■■□□ 2.56
VPS8Q8N3P4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
VPS8Q8N3P4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
VPS8Q8N3P4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC31.01■■■□□ 2.55
VPS8Q8N3P4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC31.01■■■□□ 2.55
VPS8Q8N3P4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
VPS8Q8N3P4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
VPS8Q8N3P4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC31■■■□□ 2.55
VPS8Q8N3P4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC31■■■□□ 2.55
VPS8Q8N3P4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC31■■■□□ 2.55
VPS8Q8N3P4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC31■■■□□ 2.55
VPS8Q8N3P4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC31■■■□□ 2.55
VPS8Q8N3P4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC31■■■□□ 2.55
VPS8Q8N3P4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC31■■■□□ 2.55
VPS8Q8N3P4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC31■■■□□ 2.55
VPS8Q8N3P4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
VPS8Q8N3P4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC31■■■□□ 2.55
VPS8Q8N3P4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC31■■■□□ 2.55
VPS8Q8N3P4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
VPS8Q8N3P4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC31■■■□□ 2.55
VPS8Q8N3P4 SAPCD2P4-201ENST00000424595 1171 ntBASIC30.99■■■□□ 2.55
VPS8Q8N3P4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC30.99■■■□□ 2.55
VPS8Q8N3P4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC30.99■■■□□ 2.55
VPS8Q8N3P4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC30.99■■■□□ 2.55
VPS8Q8N3P4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
VPS8Q8N3P4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
VPS8Q8N3P4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
VPS8Q8N3P4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC30.99■■■□□ 2.55
VPS8Q8N3P4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
VPS8Q8N3P4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
VPS8Q8N3P4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC30.99■■■□□ 2.55
VPS8Q8N3P4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC30.99■■■□□ 2.55
VPS8Q8N3P4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
VPS8Q8N3P4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC30.99■■■□□ 2.55
VPS8Q8N3P4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
VPS8Q8N3P4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC30.98■■■□□ 2.55
VPS8Q8N3P4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC30.98■■■□□ 2.55
VPS8Q8N3P4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
VPS8Q8N3P4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC30.98■■■□□ 2.55
VPS8Q8N3P4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
VPS8Q8N3P4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC30.98■■■□□ 2.55
VPS8Q8N3P4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
VPS8Q8N3P4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
VPS8Q8N3P4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
VPS8Q8N3P4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC30.98■■■□□ 2.55
VPS8Q8N3P4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC30.98■■■□□ 2.55
VPS8Q8N3P4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
VPS8Q8N3P4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
VPS8Q8N3P4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC30.98■■■□□ 2.55
VPS8Q8N3P4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
VPS8Q8N3P4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC30.98■■■□□ 2.55
VPS8Q8N3P4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC30.98■■■□□ 2.55
VPS8Q8N3P4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
VPS8Q8N3P4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
VPS8Q8N3P4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC30.97■■■□□ 2.55
VPS8Q8N3P4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
VPS8Q8N3P4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
VPS8Q8N3P4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC30.97■■■□□ 2.55
VPS8Q8N3P4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC30.97■■■□□ 2.55
VPS8Q8N3P4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC30.97■■■□□ 2.55
VPS8Q8N3P4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
VPS8Q8N3P4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC30.97■■■□□ 2.55
VPS8Q8N3P4 TUBB8P6-201ENST00000436895 1288 ntBASIC30.97■■■□□ 2.55
VPS8Q8N3P4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
VPS8Q8N3P4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
VPS8Q8N3P4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC30.96■■■□□ 2.55
VPS8Q8N3P4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC30.96■■■□□ 2.55
VPS8Q8N3P4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC30.96■■■□□ 2.55
VPS8Q8N3P4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
VPS8Q8N3P4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC30.96■■■□□ 2.55
VPS8Q8N3P4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
VPS8Q8N3P4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
VPS8Q8N3P4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC30.96■■■□□ 2.55
VPS8Q8N3P4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
VPS8Q8N3P4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
VPS8Q8N3P4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC30.96■■■□□ 2.55
VPS8Q8N3P4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
VPS8Q8N3P4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC30.96■■■□□ 2.55
VPS8Q8N3P4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
VPS8Q8N3P4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
VPS8Q8N3P4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
VPS8Q8N3P4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC30.95■■■□□ 2.55
VPS8Q8N3P4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC30.95■■■□□ 2.55
VPS8Q8N3P4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC30.95■■■□□ 2.55
VPS8Q8N3P4 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC30.95■■■□□ 2.55
VPS8Q8N3P4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
VPS8Q8N3P4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC30.95■■■□□ 2.54
VPS8Q8N3P4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
VPS8Q8N3P4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
VPS8Q8N3P4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
VPS8Q8N3P4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC30.94■■■□□ 2.54
VPS8Q8N3P4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC30.94■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms