Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCML4Q8N228 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SCML4Q8N228 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.59■□□□□ 0.89
SCML4Q8N228 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCML4Q8N228 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCML4Q8N228 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCML4Q8N228 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SCML4Q8N228 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
SCML4Q8N228 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SCML4Q8N228 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.59■□□□□ 0.89
SCML4Q8N228 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.59■□□□□ 0.89
SCML4Q8N228 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.59■□□□□ 0.89
SCML4Q8N228 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.59■□□□□ 0.89
SCML4Q8N228 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.59■□□□□ 0.89
SCML4Q8N228 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.59■□□□□ 0.89
SCML4Q8N228 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SCML4Q8N228 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SCML4Q8N228 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCML4Q8N228 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCML4Q8N228 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCML4Q8N228 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SCML4Q8N228 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
SCML4Q8N228 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SCML4Q8N228 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SCML4Q8N228 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
SCML4Q8N228 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.58■□□□□ 0.89
SCML4Q8N228 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.58■□□□□ 0.89
SCML4Q8N228 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SCML4Q8N228 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.58■□□□□ 0.89
SCML4Q8N228 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
SCML4Q8N228 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SCML4Q8N228 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.58■□□□□ 0.89
SCML4Q8N228 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.58■□□□□ 0.89
SCML4Q8N228 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.58■□□□□ 0.89
SCML4Q8N228 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SCML4Q8N228 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SCML4Q8N228 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.58■□□□□ 0.88
SCML4Q8N228 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.58■□□□□ 0.88
SCML4Q8N228 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.58■□□□□ 0.88
SCML4Q8N228 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SCML4Q8N228 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SCML4Q8N228 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
SCML4Q8N228 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SCML4Q8N228 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SCML4Q8N228 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SCML4Q8N228 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.57■□□□□ 0.88
SCML4Q8N228 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.57■□□□□ 0.88
SCML4Q8N228 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SCML4Q8N228 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCML4Q8N228 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.57■□□□□ 0.88
SCML4Q8N228 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.57■□□□□ 0.88
SCML4Q8N228 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
SCML4Q8N228 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCML4Q8N228 TUBB8P6-201ENST00000436895 1288 ntBASIC20.57■□□□□ 0.88
SCML4Q8N228 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.57■□□□□ 0.88
SCML4Q8N228 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.57■□□□□ 0.88
SCML4Q8N228 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.57■□□□□ 0.88
SCML4Q8N228 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.57■□□□□ 0.88
SCML4Q8N228 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.57■□□□□ 0.88
SCML4Q8N228 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.57■□□□□ 0.88
SCML4Q8N228 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.57■□□□□ 0.88
SCML4Q8N228 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.57■□□□□ 0.88
SCML4Q8N228 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.57■□□□□ 0.88
SCML4Q8N228 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCML4Q8N228 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCML4Q8N228 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCML4Q8N228 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCML4Q8N228 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SCML4Q8N228 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCML4Q8N228 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SCML4Q8N228 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.56■□□□□ 0.88
SCML4Q8N228 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.56■□□□□ 0.88
SCML4Q8N228 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SCML4Q8N228 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SCML4Q8N228 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCML4Q8N228 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCML4Q8N228 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SCML4Q8N228 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCML4Q8N228 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SCML4Q8N228 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SCML4Q8N228 AL353708.3-201ENST00000610272 989 ntBASIC20.56■□□□□ 0.88
SCML4Q8N228 AP006294.2-201ENST00000641667 209 ntBASIC20.56■□□□□ 0.88
SCML4Q8N228 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCML4Q8N228 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SCML4Q8N228 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SCML4Q8N228 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCML4Q8N228 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
SCML4Q8N228 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCML4Q8N228 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SCML4Q8N228 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
SCML4Q8N228 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
SCML4Q8N228 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCML4Q8N228 AL135905.2-201ENST00000584934 1404 ntBASIC20.55■□□□□ 0.88
SCML4Q8N228 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SCML4Q8N228 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCML4Q8N228 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
SCML4Q8N228 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SCML4Q8N228 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.55■□□□□ 0.88
SCML4Q8N228 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.55■□□□□ 0.88
SCML4Q8N228 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms