Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZC3H3Q8IXZ2 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.5■■□□□ 1.03
ZC3H3Q8IXZ2 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZC3H3Q8IXZ2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
ZC3H3Q8IXZ2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
ZC3H3Q8IXZ2 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.49■■□□□ 1.03
ZC3H3Q8IXZ2 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZC3H3Q8IXZ2 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZC3H3Q8IXZ2 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZC3H3Q8IXZ2 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZC3H3Q8IXZ2 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZC3H3Q8IXZ2 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
ZC3H3Q8IXZ2 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.49■■□□□ 1.03
ZC3H3Q8IXZ2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.49■■□□□ 1.03
ZC3H3Q8IXZ2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZC3H3Q8IXZ2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
ZC3H3Q8IXZ2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
ZC3H3Q8IXZ2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZC3H3Q8IXZ2 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ZC3H3Q8IXZ2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
ZC3H3Q8IXZ2 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ZC3H3Q8IXZ2 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZC3H3Q8IXZ2 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
ZC3H3Q8IXZ2 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
ZC3H3Q8IXZ2 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZC3H3Q8IXZ2 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZC3H3Q8IXZ2 AL355802.2-201ENST00000402069 882 ntBASIC21.48■■□□□ 1.03
ZC3H3Q8IXZ2 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.48■■□□□ 1.03
ZC3H3Q8IXZ2 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.48■■□□□ 1.03
ZC3H3Q8IXZ2 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.48■■□□□ 1.03
ZC3H3Q8IXZ2 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.48■■□□□ 1.03
ZC3H3Q8IXZ2 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZC3H3Q8IXZ2 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZC3H3Q8IXZ2 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.48■■□□□ 1.03
ZC3H3Q8IXZ2 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ZC3H3Q8IXZ2 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZC3H3Q8IXZ2 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZC3H3Q8IXZ2 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZC3H3Q8IXZ2 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ZC3H3Q8IXZ2 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.47■■□□□ 1.03
ZC3H3Q8IXZ2 AC120498.8-201ENST00000614275 531 ntBASIC21.47■■□□□ 1.03
ZC3H3Q8IXZ2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZC3H3Q8IXZ2 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ZC3H3Q8IXZ2 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.47■■□□□ 1.03
ZC3H3Q8IXZ2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZC3H3Q8IXZ2 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.47■■□□□ 1.03
ZC3H3Q8IXZ2 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.47■■□□□ 1.03
ZC3H3Q8IXZ2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
ZC3H3Q8IXZ2 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ZC3H3Q8IXZ2 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.46■■□□□ 1.03
ZC3H3Q8IXZ2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
ZC3H3Q8IXZ2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.46■■□□□ 1.03
ZC3H3Q8IXZ2 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZC3H3Q8IXZ2 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ZC3H3Q8IXZ2 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
ZC3H3Q8IXZ2 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZC3H3Q8IXZ2 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
ZC3H3Q8IXZ2 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.46■■□□□ 1.03
ZC3H3Q8IXZ2 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
ZC3H3Q8IXZ2 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZC3H3Q8IXZ2 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.46■■□□□ 1.03
ZC3H3Q8IXZ2 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZC3H3Q8IXZ2 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ZC3H3Q8IXZ2 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZC3H3Q8IXZ2 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZC3H3Q8IXZ2 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.46■■□□□ 1.03
ZC3H3Q8IXZ2 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
ZC3H3Q8IXZ2 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
ZC3H3Q8IXZ2 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
ZC3H3Q8IXZ2 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
ZC3H3Q8IXZ2 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZC3H3Q8IXZ2 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZC3H3Q8IXZ2 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.45■■□□□ 1.02
ZC3H3Q8IXZ2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.45■■□□□ 1.02
ZC3H3Q8IXZ2 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.45■■□□□ 1.02
ZC3H3Q8IXZ2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.45■■□□□ 1.02
ZC3H3Q8IXZ2 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
ZC3H3Q8IXZ2 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.45■■□□□ 1.02
ZC3H3Q8IXZ2 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZC3H3Q8IXZ2 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZC3H3Q8IXZ2 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZC3H3Q8IXZ2 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.45■■□□□ 1.02
ZC3H3Q8IXZ2 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.45■■□□□ 1.02
ZC3H3Q8IXZ2 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZC3H3Q8IXZ2 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.45■■□□□ 1.02
ZC3H3Q8IXZ2 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
ZC3H3Q8IXZ2 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZC3H3Q8IXZ2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZC3H3Q8IXZ2 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.44■■□□□ 1.02
ZC3H3Q8IXZ2 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ZC3H3Q8IXZ2 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ZC3H3Q8IXZ2 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZC3H3Q8IXZ2 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZC3H3Q8IXZ2 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZC3H3Q8IXZ2 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ZC3H3Q8IXZ2 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.44■■□□□ 1.02
ZC3H3Q8IXZ2 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ZC3H3Q8IXZ2 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZC3H3Q8IXZ2 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.44■■□□□ 1.02
ZC3H3Q8IXZ2 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms