Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDKL3Q8IVW4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDKL3Q8IVW4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDKL3Q8IVW4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CDKL3Q8IVW4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.3■□□□□ 0.84
CDKL3Q8IVW4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.3■□□□□ 0.84
CDKL3Q8IVW4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDKL3Q8IVW4 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.3■□□□□ 0.84
CDKL3Q8IVW4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.3■□□□□ 0.84
CDKL3Q8IVW4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.3■□□□□ 0.84
CDKL3Q8IVW4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.3■□□□□ 0.84
CDKL3Q8IVW4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.3■□□□□ 0.84
CDKL3Q8IVW4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.3■□□□□ 0.84
CDKL3Q8IVW4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.3■□□□□ 0.84
CDKL3Q8IVW4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CDKL3Q8IVW4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDKL3Q8IVW4 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.3■□□□□ 0.84
CDKL3Q8IVW4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.3■□□□□ 0.84
CDKL3Q8IVW4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
CDKL3Q8IVW4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDKL3Q8IVW4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CDKL3Q8IVW4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CDKL3Q8IVW4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDKL3Q8IVW4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDKL3Q8IVW4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDKL3Q8IVW4 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.29■□□□□ 0.84
CDKL3Q8IVW4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CDKL3Q8IVW4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.29■□□□□ 0.84
CDKL3Q8IVW4 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.29■□□□□ 0.84
CDKL3Q8IVW4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.29■□□□□ 0.84
CDKL3Q8IVW4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.29■□□□□ 0.84
CDKL3Q8IVW4 AC092118.2-201ENST00000613495 667 ntBASIC20.29■□□□□ 0.84
CDKL3Q8IVW4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.29■□□□□ 0.84
CDKL3Q8IVW4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDKL3Q8IVW4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.29■□□□□ 0.84
CDKL3Q8IVW4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDKL3Q8IVW4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDKL3Q8IVW4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CDKL3Q8IVW4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDKL3Q8IVW4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDKL3Q8IVW4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDKL3Q8IVW4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDKL3Q8IVW4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CDKL3Q8IVW4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDKL3Q8IVW4 SLC29A4P1-201ENST00000398760 971 ntBASIC20.28■□□□□ 0.84
CDKL3Q8IVW4 AL390719.1-204ENST00000412397 1219 ntBASIC20.28■□□□□ 0.84
CDKL3Q8IVW4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.28■□□□□ 0.84
CDKL3Q8IVW4 DUSP5P2-201ENST00000426873 1033 ntBASIC20.28■□□□□ 0.84
CDKL3Q8IVW4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.28■□□□□ 0.84
CDKL3Q8IVW4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.28■□□□□ 0.84
CDKL3Q8IVW4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CDKL3Q8IVW4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.28■□□□□ 0.84
CDKL3Q8IVW4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDKL3Q8IVW4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.28■□□□□ 0.84
CDKL3Q8IVW4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CDKL3Q8IVW4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDKL3Q8IVW4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.28■□□□□ 0.84
CDKL3Q8IVW4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDKL3Q8IVW4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDKL3Q8IVW4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CDKL3Q8IVW4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.28■□□□□ 0.84
CDKL3Q8IVW4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDKL3Q8IVW4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
CDKL3Q8IVW4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.28■□□□□ 0.84
CDKL3Q8IVW4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDKL3Q8IVW4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDKL3Q8IVW4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.27■□□□□ 0.84
CDKL3Q8IVW4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.27■□□□□ 0.84
CDKL3Q8IVW4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDKL3Q8IVW4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.27■□□□□ 0.84
CDKL3Q8IVW4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.27■□□□□ 0.84
CDKL3Q8IVW4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CDKL3Q8IVW4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDKL3Q8IVW4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDKL3Q8IVW4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDKL3Q8IVW4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CDKL3Q8IVW4 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.27■□□□□ 0.84
CDKL3Q8IVW4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CDKL3Q8IVW4 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDKL3Q8IVW4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.27■□□□□ 0.84
CDKL3Q8IVW4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDKL3Q8IVW4 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.27■□□□□ 0.84
CDKL3Q8IVW4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CDKL3Q8IVW4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
CDKL3Q8IVW4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDKL3Q8IVW4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CDKL3Q8IVW4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDKL3Q8IVW4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDKL3Q8IVW4 AC018553.1-201ENST00000616682 1458 ntBASIC20.26■□□□□ 0.83
CDKL3Q8IVW4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDKL3Q8IVW4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDKL3Q8IVW4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDKL3Q8IVW4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.26■□□□□ 0.83
CDKL3Q8IVW4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.26■□□□□ 0.83
CDKL3Q8IVW4 AC073210.2-201ENST00000430369 194 ntBASIC20.26■□□□□ 0.83
CDKL3Q8IVW4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.26■□□□□ 0.83
CDKL3Q8IVW4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDKL3Q8IVW4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDKL3Q8IVW4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.26■□□□□ 0.83
CDKL3Q8IVW4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms