Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.71■□□□□ 0.75
LDB1Q86U70 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.71■□□□□ 0.75
LDB1Q86U70 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
LDB1Q86U70 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LDB1Q86U70 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
LDB1Q86U70 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.71■□□□□ 0.75
LDB1Q86U70 AC092368.3-202ENST00000574180 1591 ntBASIC19.71■□□□□ 0.75
LDB1Q86U70 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LDB1Q86U70 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LDB1Q86U70 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.71■□□□□ 0.75
LDB1Q86U70 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LDB1Q86U70 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
LDB1Q86U70 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.71■□□□□ 0.75
LDB1Q86U70 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.71■□□□□ 0.75
LDB1Q86U70 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.71■□□□□ 0.75
LDB1Q86U70 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.71■□□□□ 0.75
LDB1Q86U70 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LDB1Q86U70 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.71■□□□□ 0.75
LDB1Q86U70 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.71■□□□□ 0.75
LDB1Q86U70 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LDB1Q86U70 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LDB1Q86U70 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LDB1Q86U70 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.71■□□□□ 0.75
LDB1Q86U70 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LDB1Q86U70 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
LDB1Q86U70 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LDB1Q86U70 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.71■□□□□ 0.75
LDB1Q86U70 AC116562.4-201ENST00000641316 2276 ntBASIC19.71■□□□□ 0.75
LDB1Q86U70 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
LDB1Q86U70 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LDB1Q86U70 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LDB1Q86U70 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LDB1Q86U70 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
LDB1Q86U70 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LDB1Q86U70 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.7■□□□□ 0.74
LDB1Q86U70 AL390719.1-204ENST00000412397 1219 ntBASIC19.7■□□□□ 0.74
LDB1Q86U70 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
LDB1Q86U70 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
LDB1Q86U70 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.7■□□□□ 0.74
LDB1Q86U70 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LDB1Q86U70 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LDB1Q86U70 AC133041.1-202ENST00000642053 222 ntBASIC19.7■□□□□ 0.74
LDB1Q86U70 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LDB1Q86U70 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LDB1Q86U70 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.7■□□□□ 0.74
LDB1Q86U70 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LDB1Q86U70 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LDB1Q86U70 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
LDB1Q86U70 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.7■□□□□ 0.74
LDB1Q86U70 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LDB1Q86U70 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LDB1Q86U70 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LDB1Q86U70 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.69■□□□□ 0.74
LDB1Q86U70 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LDB1Q86U70 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LDB1Q86U70 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LDB1Q86U70 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LDB1Q86U70 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.69■□□□□ 0.74
LDB1Q86U70 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.69■□□□□ 0.74
LDB1Q86U70 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.69■□□□□ 0.74
LDB1Q86U70 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.69■□□□□ 0.74
LDB1Q86U70 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.69■□□□□ 0.74
LDB1Q86U70 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
LDB1Q86U70 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.69■□□□□ 0.74
LDB1Q86U70 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LDB1Q86U70 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.69■□□□□ 0.74
LDB1Q86U70 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LDB1Q86U70 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LDB1Q86U70 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LDB1Q86U70 AC018553.1-201ENST00000616682 1458 ntBASIC19.68■□□□□ 0.74
LDB1Q86U70 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LDB1Q86U70 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
LDB1Q86U70 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LDB1Q86U70 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.68■□□□□ 0.74
LDB1Q86U70 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LDB1Q86U70 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LDB1Q86U70 AC007952.6-201ENST00000573168 2673 ntBASIC19.68■□□□□ 0.74
LDB1Q86U70 AC003957.1-201ENST00000625108 2673 ntBASIC19.68■□□□□ 0.74
LDB1Q86U70 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LDB1Q86U70 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.68■□□□□ 0.74
LDB1Q86U70 ID1-201ENST00000376105 1233 ntBASIC19.68■□□□□ 0.74
LDB1Q86U70 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LDB1Q86U70 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.68■□□□□ 0.74
LDB1Q86U70 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.68■□□□□ 0.74
LDB1Q86U70 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.68■□□□□ 0.74
LDB1Q86U70 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.68■□□□□ 0.74
LDB1Q86U70 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.68■□□□□ 0.74
LDB1Q86U70 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.68■□□□□ 0.74
LDB1Q86U70 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LDB1Q86U70 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LDB1Q86U70 AP001271.2-201ENST00000624018 1556 ntBASIC19.68■□□□□ 0.74
LDB1Q86U70 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LDB1Q86U70 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LDB1Q86U70 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LDB1Q86U70 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
LDB1Q86U70 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.68■□□□□ 0.74
LDB1Q86U70 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
LDB1Q86U70 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LDB1Q86U70 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
LDB1Q86U70 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms