Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
CSMD2Q7Z408 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSMD2Q7Z408 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSMD2Q7Z408 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSMD2Q7Z408 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSMD2Q7Z408 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CSMD2Q7Z408 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CSMD2Q7Z408 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.76■□□□□ 0.27
CSMD2Q7Z408 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.76■□□□□ 0.27
CSMD2Q7Z408 NPAP1P7-201ENST00000613027 823 ntBASIC16.76■□□□□ 0.27
CSMD2Q7Z408 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CSMD2Q7Z408 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CSMD2Q7Z408 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.76■□□□□ 0.27
CSMD2Q7Z408 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSMD2Q7Z408 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSMD2Q7Z408 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSMD2Q7Z408 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSMD2Q7Z408 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSMD2Q7Z408 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.76■□□□□ 0.27
CSMD2Q7Z408 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.76■□□□□ 0.27
CSMD2Q7Z408 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CSMD2Q7Z408 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSMD2Q7Z408 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSMD2Q7Z408 ATP5G2P1-201ENST00000433580 426 ntBASIC16.75■□□□□ 0.27
CSMD2Q7Z408 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSMD2Q7Z408 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSMD2Q7Z408 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSMD2Q7Z408 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.75■□□□□ 0.27
CSMD2Q7Z408 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.75■□□□□ 0.27
CSMD2Q7Z408 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
CSMD2Q7Z408 AL441883.1-201ENST00000566170 1045 ntBASIC16.75■□□□□ 0.27
CSMD2Q7Z408 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSMD2Q7Z408 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CSMD2Q7Z408 GALC-202ENST00000393568 2054 ntTSL 2 BASIC16.75■□□□□ 0.27
CSMD2Q7Z408 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CSMD2Q7Z408 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.75■□□□□ 0.27
CSMD2Q7Z408 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSMD2Q7Z408 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CSMD2Q7Z408 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CSMD2Q7Z408 MFAP1P1-201ENST00000442257 1255 ntBASIC16.75■□□□□ 0.27
CSMD2Q7Z408 YBX1P10-201ENST00000444752 975 ntBASIC16.75■□□□□ 0.27
CSMD2Q7Z408 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.75■□□□□ 0.27
CSMD2Q7Z408 C1QL1P1-201ENST00000568105 661 ntBASIC16.75■□□□□ 0.27
CSMD2Q7Z408 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSMD2Q7Z408 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSMD2Q7Z408 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSMD2Q7Z408 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.74■□□□□ 0.27
CSMD2Q7Z408 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSMD2Q7Z408 UNC93B7-201ENST00000509439 705 ntBASIC16.74■□□□□ 0.27
CSMD2Q7Z408 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.74■□□□□ 0.27
CSMD2Q7Z408 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.74■□□□□ 0.27
CSMD2Q7Z408 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CSMD2Q7Z408 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CSMD2Q7Z408 RCC2P6-201ENST00000526625 1557 ntBASIC16.74■□□□□ 0.27
CSMD2Q7Z408 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSMD2Q7Z408 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
CSMD2Q7Z408 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.74■□□□□ 0.27
CSMD2Q7Z408 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CSMD2Q7Z408 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CSMD2Q7Z408 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CSMD2Q7Z408 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.74■□□□□ 0.27
CSMD2Q7Z408 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.73■□□□□ 0.27
CSMD2Q7Z408 KRT18P38-201ENST00000449496 1282 ntBASIC16.73■□□□□ 0.27
CSMD2Q7Z408 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSMD2Q7Z408 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSMD2Q7Z408 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSMD2Q7Z408 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSMD2Q7Z408 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSMD2Q7Z408 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.73■□□□□ 0.27
CSMD2Q7Z408 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.73■□□□□ 0.27
CSMD2Q7Z408 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CSMD2Q7Z408 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CSMD2Q7Z408 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSMD2Q7Z408 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSMD2Q7Z408 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.73■□□□□ 0.27
CSMD2Q7Z408 AC092119.3-201ENST00000612618 583 ntBASIC16.73■□□□□ 0.27
CSMD2Q7Z408 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
CSMD2Q7Z408 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
CSMD2Q7Z408 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CSMD2Q7Z408 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
CSMD2Q7Z408 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSMD2Q7Z408 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.72■□□□□ 0.27
CSMD2Q7Z408 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.72■□□□□ 0.27
CSMD2Q7Z408 AC104692.2-201ENST00000603054 253 ntBASIC16.72■□□□□ 0.27
CSMD2Q7Z408 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.72■□□□□ 0.27
CSMD2Q7Z408 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.72■□□□□ 0.27
CSMD2Q7Z408 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CSMD2Q7Z408 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.72■□□□□ 0.27
CSMD2Q7Z408 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSMD2Q7Z408 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CSMD2Q7Z408 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.72■□□□□ 0.27
CSMD2Q7Z408 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSMD2Q7Z408 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSMD2Q7Z408 AL022342.1-201ENST00000400363 863 ntBASIC16.72■□□□□ 0.27
CSMD2Q7Z408 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.72■□□□□ 0.27
CSMD2Q7Z408 CKBP1-201ENST00000565489 1086 ntBASIC16.72■□□□□ 0.27
CSMD2Q7Z408 AC111152.3-201ENST00000569699 673 ntBASIC16.72■□□□□ 0.27
CSMD2Q7Z408 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSMD2Q7Z408 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSMD2Q7Z408 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms