Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
UBE3BQ7Z3V4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC24.69■■□□□ 1.54
UBE3BQ7Z3V4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC24.69■■□□□ 1.54
UBE3BQ7Z3V4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
UBE3BQ7Z3V4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
UBE3BQ7Z3V4 KRT18P16-201ENST00000510337 1294 ntBASIC24.69■■□□□ 1.54
UBE3BQ7Z3V4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
UBE3BQ7Z3V4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
UBE3BQ7Z3V4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
UBE3BQ7Z3V4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC24.69■■□□□ 1.54
UBE3BQ7Z3V4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
UBE3BQ7Z3V4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC24.68■■□□□ 1.54
UBE3BQ7Z3V4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC24.68■■□□□ 1.54
UBE3BQ7Z3V4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
UBE3BQ7Z3V4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC24.68■■□□□ 1.54
UBE3BQ7Z3V4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
UBE3BQ7Z3V4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC24.68■■□□□ 1.54
UBE3BQ7Z3V4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC24.68■■□□□ 1.54
UBE3BQ7Z3V4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
UBE3BQ7Z3V4 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
UBE3BQ7Z3V4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC24.68■■□□□ 1.54
UBE3BQ7Z3V4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
UBE3BQ7Z3V4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC24.68■■□□□ 1.54
UBE3BQ7Z3V4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC24.68■■□□□ 1.54
UBE3BQ7Z3V4 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC24.68■■□□□ 1.54
UBE3BQ7Z3V4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC24.68■■□□□ 1.54
UBE3BQ7Z3V4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC24.68■■□□□ 1.54
UBE3BQ7Z3V4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC24.68■■□□□ 1.54
UBE3BQ7Z3V4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC24.68■■□□□ 1.54
UBE3BQ7Z3V4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
UBE3BQ7Z3V4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC24.68■■□□□ 1.54
UBE3BQ7Z3V4 GABARAPL3-202ENST00000624044 1851 ntBASIC24.68■■□□□ 1.54
UBE3BQ7Z3V4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
UBE3BQ7Z3V4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC24.68■■□□□ 1.54
UBE3BQ7Z3V4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
UBE3BQ7Z3V4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC24.68■■□□□ 1.54
UBE3BQ7Z3V4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
UBE3BQ7Z3V4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
UBE3BQ7Z3V4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
UBE3BQ7Z3V4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC24.67■■□□□ 1.54
UBE3BQ7Z3V4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
UBE3BQ7Z3V4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC24.67■■□□□ 1.54
UBE3BQ7Z3V4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
UBE3BQ7Z3V4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC24.67■■□□□ 1.54
UBE3BQ7Z3V4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC24.67■■□□□ 1.54
UBE3BQ7Z3V4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC24.67■■□□□ 1.54
UBE3BQ7Z3V4 CR392000.1-201ENST00000624770 1228 ntBASIC24.67■■□□□ 1.54
UBE3BQ7Z3V4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
UBE3BQ7Z3V4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
UBE3BQ7Z3V4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
UBE3BQ7Z3V4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
UBE3BQ7Z3V4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
UBE3BQ7Z3V4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC24.66■■□□□ 1.54
UBE3BQ7Z3V4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC24.66■■□□□ 1.54
UBE3BQ7Z3V4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
UBE3BQ7Z3V4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
UBE3BQ7Z3V4 AL157384.1-201ENST00000445995 2473 ntBASIC24.66■■□□□ 1.54
UBE3BQ7Z3V4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
UBE3BQ7Z3V4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC24.66■■□□□ 1.54
UBE3BQ7Z3V4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC24.66■■□□□ 1.54
UBE3BQ7Z3V4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC24.66■■□□□ 1.54
UBE3BQ7Z3V4 AC211429.1-201ENST00000415277 523 ntBASIC24.66■■□□□ 1.54
UBE3BQ7Z3V4 ECEL1P3-201ENST00000427961 737 ntBASIC24.66■■□□□ 1.54
UBE3BQ7Z3V4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC24.66■■□□□ 1.54
UBE3BQ7Z3V4 KSR1P1-201ENST00000446298 240 ntBASIC24.66■■□□□ 1.54
UBE3BQ7Z3V4 NUDT16P1-203ENST00000513809 620 ntBASIC24.66■■□□□ 1.54
UBE3BQ7Z3V4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC24.66■■□□□ 1.54
UBE3BQ7Z3V4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
UBE3BQ7Z3V4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
UBE3BQ7Z3V4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
UBE3BQ7Z3V4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
UBE3BQ7Z3V4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
UBE3BQ7Z3V4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
UBE3BQ7Z3V4 AL691432.2-201ENST00000607222 2038 ntBASIC24.66■■□□□ 1.54
UBE3BQ7Z3V4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
UBE3BQ7Z3V4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC24.66■■□□□ 1.54
UBE3BQ7Z3V4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
UBE3BQ7Z3V4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
UBE3BQ7Z3V4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
UBE3BQ7Z3V4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
UBE3BQ7Z3V4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
UBE3BQ7Z3V4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC24.65■■□□□ 1.54
UBE3BQ7Z3V4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
UBE3BQ7Z3V4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
UBE3BQ7Z3V4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
UBE3BQ7Z3V4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
UBE3BQ7Z3V4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
UBE3BQ7Z3V4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC24.65■■□□□ 1.54
UBE3BQ7Z3V4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC24.65■■□□□ 1.54
UBE3BQ7Z3V4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC24.65■■□□□ 1.54
UBE3BQ7Z3V4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
UBE3BQ7Z3V4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC24.65■■□□□ 1.54
UBE3BQ7Z3V4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
UBE3BQ7Z3V4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
UBE3BQ7Z3V4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
UBE3BQ7Z3V4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
UBE3BQ7Z3V4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
UBE3BQ7Z3V4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
UBE3BQ7Z3V4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
UBE3BQ7Z3V4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms