Protein–RNA interactions for Protein: Q6PEY2

TUBA3E, Tubulin alpha-3E chain, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3EQ6PEY2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TUBA3EQ6PEY2 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TUBA3EQ6PEY2 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TUBA3EQ6PEY2 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TUBA3EQ6PEY2 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TUBA3EQ6PEY2 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TUBA3EQ6PEY2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.69■□□□□ 0.58
TUBA3EQ6PEY2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TUBA3EQ6PEY2 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBA3EQ6PEY2 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBA3EQ6PEY2 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TUBA3EQ6PEY2 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBA3EQ6PEY2 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TUBA3EQ6PEY2 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TUBA3EQ6PEY2 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.68■□□□□ 0.58
TUBA3EQ6PEY2 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.68■□□□□ 0.58
TUBA3EQ6PEY2 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.68■□□□□ 0.58
TUBA3EQ6PEY2 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.68■□□□□ 0.58
TUBA3EQ6PEY2 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.68■□□□□ 0.58
TUBA3EQ6PEY2 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TUBA3EQ6PEY2 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.68■□□□□ 0.58
TUBA3EQ6PEY2 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TUBA3EQ6PEY2 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBA3EQ6PEY2 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TUBA3EQ6PEY2 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBA3EQ6PEY2 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBA3EQ6PEY2 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBA3EQ6PEY2 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBA3EQ6PEY2 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.68■□□□□ 0.58
TUBA3EQ6PEY2 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
TUBA3EQ6PEY2 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.68■□□□□ 0.58
TUBA3EQ6PEY2 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
TUBA3EQ6PEY2 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBA3EQ6PEY2 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBA3EQ6PEY2 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBA3EQ6PEY2 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBA3EQ6PEY2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBA3EQ6PEY2 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.67■□□□□ 0.58
TUBA3EQ6PEY2 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBA3EQ6PEY2 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBA3EQ6PEY2 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.67■□□□□ 0.58
TUBA3EQ6PEY2 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.67■□□□□ 0.58
TUBA3EQ6PEY2 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.67■□□□□ 0.58
TUBA3EQ6PEY2 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBA3EQ6PEY2 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TUBA3EQ6PEY2 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.67■□□□□ 0.58
TUBA3EQ6PEY2 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.67■□□□□ 0.58
TUBA3EQ6PEY2 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBA3EQ6PEY2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBA3EQ6PEY2 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TUBA3EQ6PEY2 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
TUBA3EQ6PEY2 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TUBA3EQ6PEY2 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBA3EQ6PEY2 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TUBA3EQ6PEY2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TUBA3EQ6PEY2 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBA3EQ6PEY2 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBA3EQ6PEY2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBA3EQ6PEY2 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.66■□□□□ 0.58
TUBA3EQ6PEY2 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.66■□□□□ 0.58
TUBA3EQ6PEY2 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.66■□□□□ 0.58
TUBA3EQ6PEY2 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.66■□□□□ 0.58
TUBA3EQ6PEY2 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBA3EQ6PEY2 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.66■□□□□ 0.58
TUBA3EQ6PEY2 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBA3EQ6PEY2 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBA3EQ6PEY2 PCDHAC2-203ENST00000615316 3011 ntBASIC18.66■□□□□ 0.58
TUBA3EQ6PEY2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBA3EQ6PEY2 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBA3EQ6PEY2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBA3EQ6PEY2 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TUBA3EQ6PEY2 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBA3EQ6PEY2 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.66■□□□□ 0.58
TUBA3EQ6PEY2 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.66■□□□□ 0.58
TUBA3EQ6PEY2 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBA3EQ6PEY2 AC098818.2-201ENST00000564925 2320 ntBASIC18.66■□□□□ 0.58
TUBA3EQ6PEY2 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.66■□□□□ 0.58
TUBA3EQ6PEY2 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TUBA3EQ6PEY2 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBA3EQ6PEY2 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBA3EQ6PEY2 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.65■□□□□ 0.58
TUBA3EQ6PEY2 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBA3EQ6PEY2 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.65■□□□□ 0.58
TUBA3EQ6PEY2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBA3EQ6PEY2 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBA3EQ6PEY2 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TUBA3EQ6PEY2 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBA3EQ6PEY2 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TUBA3EQ6PEY2 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBA3EQ6PEY2 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
TUBA3EQ6PEY2 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.65■□□□□ 0.58
TUBA3EQ6PEY2 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
TUBA3EQ6PEY2 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.65■□□□□ 0.58
TUBA3EQ6PEY2 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.65■□□□□ 0.58
TUBA3EQ6PEY2 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TUBA3EQ6PEY2 AC233263.1-201ENST00000578059 224 ntBASIC18.65■□□□□ 0.58
TUBA3EQ6PEY2 AL359736.2-201ENST00000621992 437 ntBASIC18.65■□□□□ 0.58
TUBA3EQ6PEY2 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TUBA3EQ6PEY2 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
TUBA3EQ6PEY2 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms