Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDPF1Q6NVV7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDPF1Q6NVV7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CDPF1Q6NVV7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CDPF1Q6NVV7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC15□□□□□ -0.01
CDPF1Q6NVV7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDPF1Q6NVV7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CDPF1Q6NVV7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CDPF1Q6NVV7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDPF1Q6NVV7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDPF1Q6NVV7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CDPF1Q6NVV7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDPF1Q6NVV7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC15□□□□□ -0.01
CDPF1Q6NVV7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDPF1Q6NVV7 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CDPF1Q6NVV7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDPF1Q6NVV7 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDPF1Q6NVV7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDPF1Q6NVV7 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CDPF1Q6NVV7 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
CDPF1Q6NVV7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDPF1Q6NVV7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC14.99□□□□□ -0.01
CDPF1Q6NVV7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC14.99□□□□□ -0.01
CDPF1Q6NVV7 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDPF1Q6NVV7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC14.99□□□□□ -0.01
CDPF1Q6NVV7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.99□□□□□ -0.01
CDPF1Q6NVV7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC14.99□□□□□ -0.01
CDPF1Q6NVV7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CDPF1Q6NVV7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDPF1Q6NVV7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDPF1Q6NVV7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDPF1Q6NVV7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
CDPF1Q6NVV7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC14.99□□□□□ -0.01
CDPF1Q6NVV7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDPF1Q6NVV7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC14.99□□□□□ -0.01
CDPF1Q6NVV7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC14.99□□□□□ -0.01
CDPF1Q6NVV7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC14.99□□□□□ -0.01
CDPF1Q6NVV7 RARRES2P6-201ENST00000567333 442 ntBASIC14.99□□□□□ -0.01
CDPF1Q6NVV7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CDPF1Q6NVV7 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDPF1Q6NVV7 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDPF1Q6NVV7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDPF1Q6NVV7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDPF1Q6NVV7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDPF1Q6NVV7 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDPF1Q6NVV7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDPF1Q6NVV7 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
CDPF1Q6NVV7 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDPF1Q6NVV7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDPF1Q6NVV7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CDPF1Q6NVV7 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDPF1Q6NVV7 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CDPF1Q6NVV7 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDPF1Q6NVV7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDPF1Q6NVV7 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDPF1Q6NVV7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC14.98□□□□□ -0.01
CDPF1Q6NVV7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDPF1Q6NVV7 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDPF1Q6NVV7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDPF1Q6NVV7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDPF1Q6NVV7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDPF1Q6NVV7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC14.98□□□□□ -0.01
CDPF1Q6NVV7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC14.98□□□□□ -0.01
CDPF1Q6NVV7 AC024257.2-201ENST00000549699 147 ntBASIC14.98□□□□□ -0.01
CDPF1Q6NVV7 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDPF1Q6NVV7 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDPF1Q6NVV7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC14.98□□□□□ -0.01
CDPF1Q6NVV7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDPF1Q6NVV7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDPF1Q6NVV7 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDPF1Q6NVV7 BICD1-207ENST00000551848 1962 ntBASIC14.98□□□□□ -0.01
CDPF1Q6NVV7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDPF1Q6NVV7 SYT6-210ENST00000641643 1587 ntBASIC14.98□□□□□ -0.01
CDPF1Q6NVV7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CDPF1Q6NVV7 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDPF1Q6NVV7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDPF1Q6NVV7 LINC01465-201ENST00000408887 1940 ntBASIC14.98□□□□□ -0.01
CDPF1Q6NVV7 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDPF1Q6NVV7 REST-206ENST00000612429 1376 ntTSL 5 BASIC14.98□□□□□ -0.01
CDPF1Q6NVV7 REST-207ENST00000616975 1370 ntTSL 5 BASIC14.98□□□□□ -0.01
CDPF1Q6NVV7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDPF1Q6NVV7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDPF1Q6NVV7 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDPF1Q6NVV7 AC080080.1-201ENST00000625121 2420 ntBASIC14.97□□□□□ -0.01
CDPF1Q6NVV7 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC14.97□□□□□ -0.01
CDPF1Q6NVV7 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDPF1Q6NVV7 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDPF1Q6NVV7 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC14.97□□□□□ -0.01
CDPF1Q6NVV7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDPF1Q6NVV7 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CDPF1Q6NVV7 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDPF1Q6NVV7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
CDPF1Q6NVV7 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CDPF1Q6NVV7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDPF1Q6NVV7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDPF1Q6NVV7 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CDPF1Q6NVV7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDPF1Q6NVV7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC14.97□□□□□ -0.01
CDPF1Q6NVV7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDPF1Q6NVV7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms