Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC30.09■■■□□ 2.41
CDC42BPAQ5VT25 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
CDC42BPAQ5VT25 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC30.08■■■□□ 2.41
CDC42BPAQ5VT25 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC30.08■■■□□ 2.41
CDC42BPAQ5VT25 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC30.08■■■□□ 2.41
CDC42BPAQ5VT25 YBX1P2-201ENST00000489612 999 ntBASIC30.08■■■□□ 2.41
CDC42BPAQ5VT25 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC30.08■■■□□ 2.41
CDC42BPAQ5VT25 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CDC42BPAQ5VT25 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CDC42BPAQ5VT25 TMEM179-206ENST00000616017 1645 ntBASIC30.08■■■□□ 2.41
CDC42BPAQ5VT25 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC30.08■■■□□ 2.41
CDC42BPAQ5VT25 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC30.08■■■□□ 2.41
CDC42BPAQ5VT25 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC30.08■■■□□ 2.41
CDC42BPAQ5VT25 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CDC42BPAQ5VT25 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC30.08■■■□□ 2.41
CDC42BPAQ5VT25 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC30.08■■■□□ 2.41
CDC42BPAQ5VT25 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CDC42BPAQ5VT25 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CDC42BPAQ5VT25 AC004951.3-201ENST00000418645 1148 ntBASIC30.08■■■□□ 2.41
CDC42BPAQ5VT25 FAM207BP-201ENST00000447172 505 ntBASIC30.08■■■□□ 2.41
CDC42BPAQ5VT25 SLC25A1P4-201ENST00000567977 778 ntBASIC30.08■■■□□ 2.41
CDC42BPAQ5VT25 AC133561.1-201ENST00000568600 2415 ntBASIC30.07■■■□□ 2.41
CDC42BPAQ5VT25 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CDC42BPAQ5VT25 AC007663.1-201ENST00000438948 1240 ntBASIC30.07■■■□□ 2.4
CDC42BPAQ5VT25 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC30.07■■■□□ 2.4
CDC42BPAQ5VT25 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC30.07■■■□□ 2.4
CDC42BPAQ5VT25 USF2-205ENST00000594064 1179 ntTSL 2 BASIC30.07■■■□□ 2.4
CDC42BPAQ5VT25 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
CDC42BPAQ5VT25 BX119927.1-201ENST00000636596 1552 ntBASIC30.07■■■□□ 2.4
CDC42BPAQ5VT25 AC092720.2-201ENST00000602388 1665 ntBASIC30.07■■■□□ 2.4
CDC42BPAQ5VT25 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC30.07■■■□□ 2.4
CDC42BPAQ5VT25 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC30.06■■■□□ 2.4
CDC42BPAQ5VT25 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC30.06■■■□□ 2.4
CDC42BPAQ5VT25 ATP5G1P1-201ENST00000448724 379 ntBASIC30.06■■■□□ 2.4
CDC42BPAQ5VT25 GLRB-205ENST00000512619 728 ntTSL 3 BASIC30.06■■■□□ 2.4
CDC42BPAQ5VT25 AL138966.2-201ENST00000621997 464 ntBASIC30.06■■■□□ 2.4
CDC42BPAQ5VT25 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CDC42BPAQ5VT25 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CDC42BPAQ5VT25 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
CDC42BPAQ5VT25 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC30.06■■■□□ 2.4
CDC42BPAQ5VT25 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC30.06■■■□□ 2.4
CDC42BPAQ5VT25 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
CDC42BPAQ5VT25 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC30.05■■■□□ 2.4
CDC42BPAQ5VT25 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CDC42BPAQ5VT25 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC30.05■■■□□ 2.4
CDC42BPAQ5VT25 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC30.05■■■□□ 2.4
CDC42BPAQ5VT25 METTL23-204ENST00000586752 904 ntTSL 2 BASIC30.05■■■□□ 2.4
CDC42BPAQ5VT25 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC30.05■■■□□ 2.4
CDC42BPAQ5VT25 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
CDC42BPAQ5VT25 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CDC42BPAQ5VT25 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CDC42BPAQ5VT25 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
CDC42BPAQ5VT25 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC30.05■■■□□ 2.4
CDC42BPAQ5VT25 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC30.05■■■□□ 2.4
CDC42BPAQ5VT25 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC30.05■■■□□ 2.4
CDC42BPAQ5VT25 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC30.05■■■□□ 2.4
CDC42BPAQ5VT25 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
CDC42BPAQ5VT25 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CDC42BPAQ5VT25 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC30.04■■■□□ 2.4
CDC42BPAQ5VT25 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC30.04■■■□□ 2.4
CDC42BPAQ5VT25 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CDC42BPAQ5VT25 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CDC42BPAQ5VT25 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC30.04■■■□□ 2.4
CDC42BPAQ5VT25 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CDC42BPAQ5VT25 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CDC42BPAQ5VT25 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CDC42BPAQ5VT25 ISCU-203ENST00000431221 799 ntTSL 2 BASIC30.04■■■□□ 2.4
CDC42BPAQ5VT25 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC30.04■■■□□ 2.4
CDC42BPAQ5VT25 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC30.04■■■□□ 2.4
CDC42BPAQ5VT25 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
CDC42BPAQ5VT25 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CDC42BPAQ5VT25 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CDC42BPAQ5VT25 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CDC42BPAQ5VT25 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC30.03■■■□□ 2.4
CDC42BPAQ5VT25 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC30.03■■■□□ 2.4
CDC42BPAQ5VT25 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CDC42BPAQ5VT25 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC30.03■■■□□ 2.4
CDC42BPAQ5VT25 AC008040.2-201ENST00000461049 708 ntBASIC30.03■■■□□ 2.4
CDC42BPAQ5VT25 AC091390.4-202ENST00000476426 537 ntBASIC30.03■■■□□ 2.4
CDC42BPAQ5VT25 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC30.03■■■□□ 2.4
CDC42BPAQ5VT25 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC30.03■■■□□ 2.4
CDC42BPAQ5VT25 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC30.03■■■□□ 2.4
CDC42BPAQ5VT25 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
CDC42BPAQ5VT25 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC30.03■■■□□ 2.4
CDC42BPAQ5VT25 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC30.03■■■□□ 2.4
CDC42BPAQ5VT25 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC30.03■■■□□ 2.4
CDC42BPAQ5VT25 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC30.03■■■□□ 2.4
CDC42BPAQ5VT25 ANKRD20A18P-201ENST00000359341 492 ntBASIC30.02■■■□□ 2.4
CDC42BPAQ5VT25 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
CDC42BPAQ5VT25 NMU-205ENST00000511469 756 ntTSL 3 BASIC30.02■■■□□ 2.4
CDC42BPAQ5VT25 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
CDC42BPAQ5VT25 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC30.02■■■□□ 2.4
CDC42BPAQ5VT25 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC30.02■■■□□ 2.4
CDC42BPAQ5VT25 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
CDC42BPAQ5VT25 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CDC42BPAQ5VT25 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
CDC42BPAQ5VT25 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC30.02■■■□□ 2.4
CDC42BPAQ5VT25 CYGB-204ENST00000589342 815 ntTSL 3 BASIC30.02■■■□□ 2.4
CDC42BPAQ5VT25 AL358472.4-201ENST00000633140 710 ntBASIC30.02■■■□□ 2.4
CDC42BPAQ5VT25 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms