Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATPAF1Q5TC12 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.1■□□□□ 0.33
ATPAF1Q5TC12 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATPAF1Q5TC12 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.1■□□□□ 0.33
ATPAF1Q5TC12 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATPAF1Q5TC12 MCRIP2P1-201ENST00000394346 511 ntBASIC17.1■□□□□ 0.33
ATPAF1Q5TC12 NCF1B-203ENST00000435988 1254 ntBASIC17.1■□□□□ 0.33
ATPAF1Q5TC12 AC090192.1-201ENST00000517740 490 ntBASIC17.1■□□□□ 0.33
ATPAF1Q5TC12 AF201337.1-201ENST00000520239 748 ntBASIC17.1■□□□□ 0.33
ATPAF1Q5TC12 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATPAF1Q5TC12 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.1■□□□□ 0.33
ATPAF1Q5TC12 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATPAF1Q5TC12 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.1■□□□□ 0.33
ATPAF1Q5TC12 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATPAF1Q5TC12 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATPAF1Q5TC12 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATPAF1Q5TC12 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATPAF1Q5TC12 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.1■□□□□ 0.33
ATPAF1Q5TC12 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.1■□□□□ 0.33
ATPAF1Q5TC12 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATPAF1Q5TC12 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATPAF1Q5TC12 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ATPAF1Q5TC12 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATPAF1Q5TC12 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.09■□□□□ 0.33
ATPAF1Q5TC12 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.09■□□□□ 0.33
ATPAF1Q5TC12 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.09■□□□□ 0.33
ATPAF1Q5TC12 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
ATPAF1Q5TC12 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ATPAF1Q5TC12 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
ATPAF1Q5TC12 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATPAF1Q5TC12 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATPAF1Q5TC12 PGM5P4-201ENST00000421970 445 ntBASIC17.09■□□□□ 0.33
ATPAF1Q5TC12 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATPAF1Q5TC12 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ATPAF1Q5TC12 AL121832.2-201ENST00000610979 668 ntBASIC17.09■□□□□ 0.33
ATPAF1Q5TC12 MIR2861-201ENST00000636310 90 ntBASIC17.09■□□□□ 0.33
ATPAF1Q5TC12 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.09■□□□□ 0.33
ATPAF1Q5TC12 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATPAF1Q5TC12 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.09■□□□□ 0.33
ATPAF1Q5TC12 AC010980.2-201ENST00000587099 1412 ntBASIC17.09■□□□□ 0.33
ATPAF1Q5TC12 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
ATPAF1Q5TC12 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATPAF1Q5TC12 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATPAF1Q5TC12 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
ATPAF1Q5TC12 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATPAF1Q5TC12 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
ATPAF1Q5TC12 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATPAF1Q5TC12 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATPAF1Q5TC12 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ATPAF1Q5TC12 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
ATPAF1Q5TC12 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.08■□□□□ 0.33
ATPAF1Q5TC12 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.08■□□□□ 0.33
ATPAF1Q5TC12 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.08■□□□□ 0.33
ATPAF1Q5TC12 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATPAF1Q5TC12 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATPAF1Q5TC12 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATPAF1Q5TC12 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.08■□□□□ 0.32
ATPAF1Q5TC12 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATPAF1Q5TC12 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
ATPAF1Q5TC12 CYP21A1P-202ENST00000354927 1481 ntBASIC17.08■□□□□ 0.32
ATPAF1Q5TC12 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
ATPAF1Q5TC12 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.08■□□□□ 0.32
ATPAF1Q5TC12 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATPAF1Q5TC12 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.08■□□□□ 0.32
ATPAF1Q5TC12 AC083906.2-201ENST00000511578 360 ntBASIC17.08■□□□□ 0.32
ATPAF1Q5TC12 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.08■□□□□ 0.32
ATPAF1Q5TC12 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.08■□□□□ 0.32
ATPAF1Q5TC12 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATPAF1Q5TC12 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATPAF1Q5TC12 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.08■□□□□ 0.32
ATPAF1Q5TC12 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
ATPAF1Q5TC12 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATPAF1Q5TC12 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATPAF1Q5TC12 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
ATPAF1Q5TC12 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATPAF1Q5TC12 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.08■□□□□ 0.32
ATPAF1Q5TC12 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATPAF1Q5TC12 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.08■□□□□ 0.32
ATPAF1Q5TC12 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.08■□□□□ 0.32
ATPAF1Q5TC12 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATPAF1Q5TC12 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATPAF1Q5TC12 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.07■□□□□ 0.32
ATPAF1Q5TC12 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATPAF1Q5TC12 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.07■□□□□ 0.32
ATPAF1Q5TC12 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATPAF1Q5TC12 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATPAF1Q5TC12 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.07■□□□□ 0.32
ATPAF1Q5TC12 AC087633.2-202ENST00000565166 1439 ntBASIC17.07■□□□□ 0.32
ATPAF1Q5TC12 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATPAF1Q5TC12 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATPAF1Q5TC12 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.07■□□□□ 0.32
ATPAF1Q5TC12 AC105036.2-201ENST00000569468 176 ntBASIC17.07■□□□□ 0.32
ATPAF1Q5TC12 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATPAF1Q5TC12 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
ATPAF1Q5TC12 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ATPAF1Q5TC12 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATPAF1Q5TC12 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATPAF1Q5TC12 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATPAF1Q5TC12 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATPAF1Q5TC12 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms