Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ERCC6LQ2NKX8 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.9■□□□□ 0.94
ERCC6LQ2NKX8 NOC2LP1-202ENST00000452600 2235 ntBASIC20.9■□□□□ 0.94
ERCC6LQ2NKX8 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.9■□□□□ 0.94
ERCC6LQ2NKX8 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ERCC6LQ2NKX8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.9■□□□□ 0.94
ERCC6LQ2NKX8 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ERCC6LQ2NKX8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.9■□□□□ 0.94
ERCC6LQ2NKX8 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ERCC6LQ2NKX8 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ERCC6LQ2NKX8 AC116050.2-201ENST00000612102 1779 ntBASIC20.9■□□□□ 0.94
ERCC6LQ2NKX8 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
ERCC6LQ2NKX8 SRD5A1P1-201ENST00000442297 786 ntBASIC20.9■□□□□ 0.94
ERCC6LQ2NKX8 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.9■□□□□ 0.94
ERCC6LQ2NKX8 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.9■□□□□ 0.94
ERCC6LQ2NKX8 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ERCC6LQ2NKX8 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
ERCC6LQ2NKX8 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
ERCC6LQ2NKX8 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.9■□□□□ 0.94
ERCC6LQ2NKX8 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ERCC6LQ2NKX8 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.9■□□□□ 0.94
ERCC6LQ2NKX8 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ERCC6LQ2NKX8 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.9■□□□□ 0.94
ERCC6LQ2NKX8 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ERCC6LQ2NKX8 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
ERCC6LQ2NKX8 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ERCC6LQ2NKX8 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ERCC6LQ2NKX8 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
ERCC6LQ2NKX8 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
ERCC6LQ2NKX8 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ERCC6LQ2NKX8 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ERCC6LQ2NKX8 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.89■□□□□ 0.93
ERCC6LQ2NKX8 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
ERCC6LQ2NKX8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ERCC6LQ2NKX8 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
ERCC6LQ2NKX8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.89■□□□□ 0.93
ERCC6LQ2NKX8 AL138724.1-201ENST00000606771 1088 ntBASIC20.89■□□□□ 0.93
ERCC6LQ2NKX8 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ERCC6LQ2NKX8 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
ERCC6LQ2NKX8 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ERCC6LQ2NKX8 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.89■□□□□ 0.93
ERCC6LQ2NKX8 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.89■□□□□ 0.93
ERCC6LQ2NKX8 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ERCC6LQ2NKX8 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ERCC6LQ2NKX8 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ERCC6LQ2NKX8 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ERCC6LQ2NKX8 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ERCC6LQ2NKX8 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ERCC6LQ2NKX8 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ERCC6LQ2NKX8 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
ERCC6LQ2NKX8 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ERCC6LQ2NKX8 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ERCC6LQ2NKX8 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.88■□□□□ 0.93
ERCC6LQ2NKX8 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ERCC6LQ2NKX8 AL161938.1-201ENST00000569833 2180 ntBASIC20.88■□□□□ 0.93
ERCC6LQ2NKX8 AC138932.1-201ENST00000534164 6830 ntBASIC20.88■□□□□ 0.93
ERCC6LQ2NKX8 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.88■□□□□ 0.93
ERCC6LQ2NKX8 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ERCC6LQ2NKX8 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
ERCC6LQ2NKX8 MIR3621-201ENST00000580529 85 ntBASIC20.88■□□□□ 0.93
ERCC6LQ2NKX8 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ERCC6LQ2NKX8 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ERCC6LQ2NKX8 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
ERCC6LQ2NKX8 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ERCC6LQ2NKX8 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ERCC6LQ2NKX8 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ERCC6LQ2NKX8 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.88■□□□□ 0.93
ERCC6LQ2NKX8 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.88■□□□□ 0.93
ERCC6LQ2NKX8 WIZP1-201ENST00000531444 2299 ntBASIC20.88■□□□□ 0.93
ERCC6LQ2NKX8 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ERCC6LQ2NKX8 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
ERCC6LQ2NKX8 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
ERCC6LQ2NKX8 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
ERCC6LQ2NKX8 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
ERCC6LQ2NKX8 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC6LQ2NKX8 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC6LQ2NKX8 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC6LQ2NKX8 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
ERCC6LQ2NKX8 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
ERCC6LQ2NKX8 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.87■□□□□ 0.93
ERCC6LQ2NKX8 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.87■□□□□ 0.93
ERCC6LQ2NKX8 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC6LQ2NKX8 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC6LQ2NKX8 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC6LQ2NKX8 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.87■□□□□ 0.93
ERCC6LQ2NKX8 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.87■□□□□ 0.93
ERCC6LQ2NKX8 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
ERCC6LQ2NKX8 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.87■□□□□ 0.93
ERCC6LQ2NKX8 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
ERCC6LQ2NKX8 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC6LQ2NKX8 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.87■□□□□ 0.93
ERCC6LQ2NKX8 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.87■□□□□ 0.93
ERCC6LQ2NKX8 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.87■□□□□ 0.93
ERCC6LQ2NKX8 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
ERCC6LQ2NKX8 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
ERCC6LQ2NKX8 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC6LQ2NKX8 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
ERCC6LQ2NKX8 BICD1-207ENST00000551848 1962 ntBASIC20.86■□□□□ 0.93
ERCC6LQ2NKX8 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
ERCC6LQ2NKX8 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms