Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RSPO1Q2MKA7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.14■□□□□ 0.33
RSPO1Q2MKA7 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.14■□□□□ 0.33
RSPO1Q2MKA7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
RSPO1Q2MKA7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO1Q2MKA7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO1Q2MKA7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.14■□□□□ 0.33
RSPO1Q2MKA7 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO1Q2MKA7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO1Q2MKA7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO1Q2MKA7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.14■□□□□ 0.33
RSPO1Q2MKA7 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO1Q2MKA7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RSPO1Q2MKA7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RSPO1Q2MKA7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.13■□□□□ 0.33
RSPO1Q2MKA7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RSPO1Q2MKA7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.13■□□□□ 0.33
RSPO1Q2MKA7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RSPO1Q2MKA7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RSPO1Q2MKA7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.13■□□□□ 0.33
RSPO1Q2MKA7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RSPO1Q2MKA7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
RSPO1Q2MKA7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RSPO1Q2MKA7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RSPO1Q2MKA7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.13■□□□□ 0.33
RSPO1Q2MKA7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RSPO1Q2MKA7 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.13■□□□□ 0.33
RSPO1Q2MKA7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.13■□□□□ 0.33
RSPO1Q2MKA7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.13■□□□□ 0.33
RSPO1Q2MKA7 AC120498.8-201ENST00000614275 531 ntBASIC17.13■□□□□ 0.33
RSPO1Q2MKA7 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.13■□□□□ 0.33
RSPO1Q2MKA7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RSPO1Q2MKA7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.13■□□□□ 0.33
RSPO1Q2MKA7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
RSPO1Q2MKA7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.13■□□□□ 0.33
RSPO1Q2MKA7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RSPO1Q2MKA7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
RSPO1Q2MKA7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.13■□□□□ 0.33
RSPO1Q2MKA7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RSPO1Q2MKA7 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.13■□□□□ 0.33
RSPO1Q2MKA7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RSPO1Q2MKA7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RSPO1Q2MKA7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.12■□□□□ 0.33
RSPO1Q2MKA7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RSPO1Q2MKA7 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RSPO1Q2MKA7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.12■□□□□ 0.33
RSPO1Q2MKA7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RSPO1Q2MKA7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RSPO1Q2MKA7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RSPO1Q2MKA7 AL355802.2-201ENST00000402069 882 ntBASIC17.12■□□□□ 0.33
RSPO1Q2MKA7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.12■□□□□ 0.33
RSPO1Q2MKA7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.12■□□□□ 0.33
RSPO1Q2MKA7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.12■□□□□ 0.33
RSPO1Q2MKA7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.12■□□□□ 0.33
RSPO1Q2MKA7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.12■□□□□ 0.33
RSPO1Q2MKA7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.12■□□□□ 0.33
RSPO1Q2MKA7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
RSPO1Q2MKA7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.12■□□□□ 0.33
RSPO1Q2MKA7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RSPO1Q2MKA7 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RSPO1Q2MKA7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RSPO1Q2MKA7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RSPO1Q2MKA7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
RSPO1Q2MKA7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.12■□□□□ 0.33
RSPO1Q2MKA7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RSPO1Q2MKA7 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RSPO1Q2MKA7 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RSPO1Q2MKA7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.11■□□□□ 0.33
RSPO1Q2MKA7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RSPO1Q2MKA7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.11■□□□□ 0.33
RSPO1Q2MKA7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RSPO1Q2MKA7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.11■□□□□ 0.33
RSPO1Q2MKA7 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RSPO1Q2MKA7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RSPO1Q2MKA7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.11■□□□□ 0.33
RSPO1Q2MKA7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RSPO1Q2MKA7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RSPO1Q2MKA7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RSPO1Q2MKA7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
RSPO1Q2MKA7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RSPO1Q2MKA7 AC005332.7-201ENST00000614046 2005 ntBASIC17.11■□□□□ 0.33
RSPO1Q2MKA7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RSPO1Q2MKA7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RSPO1Q2MKA7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RSPO1Q2MKA7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.11■□□□□ 0.33
RSPO1Q2MKA7 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.11■□□□□ 0.33
RSPO1Q2MKA7 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
RSPO1Q2MKA7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RSPO1Q2MKA7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RSPO1Q2MKA7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RSPO1Q2MKA7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RSPO1Q2MKA7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RSPO1Q2MKA7 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RSPO1Q2MKA7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.1■□□□□ 0.33
RSPO1Q2MKA7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
RSPO1Q2MKA7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.1■□□□□ 0.33
RSPO1Q2MKA7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.1■□□□□ 0.33
RSPO1Q2MKA7 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.1■□□□□ 0.33
RSPO1Q2MKA7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.1■□□□□ 0.33
RSPO1Q2MKA7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms