Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMGCS1Q01581 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HMGCS1Q01581 AC005332.7-201ENST00000614046 2005 ntBASIC19.02■□□□□ 0.64
HMGCS1Q01581 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.02■□□□□ 0.64
HMGCS1Q01581 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
HMGCS1Q01581 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMGCS1Q01581 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMGCS1Q01581 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.02■□□□□ 0.64
HMGCS1Q01581 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HMGCS1Q01581 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.02■□□□□ 0.64
HMGCS1Q01581 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.02■□□□□ 0.64
HMGCS1Q01581 AF201337.1-201ENST00000520239 748 ntBASIC19.02■□□□□ 0.64
HMGCS1Q01581 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.02■□□□□ 0.64
HMGCS1Q01581 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.02■□□□□ 0.64
HMGCS1Q01581 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.02■□□□□ 0.64
HMGCS1Q01581 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMGCS1Q01581 PHGDH-210ENST00000641115 1638 ntBASIC19.02■□□□□ 0.64
HMGCS1Q01581 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMGCS1Q01581 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMGCS1Q01581 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
HMGCS1Q01581 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.02■□□□□ 0.63
HMGCS1Q01581 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HMGCS1Q01581 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HMGCS1Q01581 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCS1Q01581 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCS1Q01581 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.01■□□□□ 0.63
HMGCS1Q01581 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCS1Q01581 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.01■□□□□ 0.63
HMGCS1Q01581 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
HMGCS1Q01581 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
HMGCS1Q01581 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCS1Q01581 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.01■□□□□ 0.63
HMGCS1Q01581 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCS1Q01581 AC090192.1-201ENST00000517740 490 ntBASIC19.01■□□□□ 0.63
HMGCS1Q01581 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCS1Q01581 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCS1Q01581 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCS1Q01581 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCS1Q01581 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCS1Q01581 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.01■□□□□ 0.63
HMGCS1Q01581 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCS1Q01581 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.01■□□□□ 0.63
HMGCS1Q01581 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.01■□□□□ 0.63
HMGCS1Q01581 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCS1Q01581 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
HMGCS1Q01581 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HMGCS1Q01581 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGCS1Q01581 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19■□□□□ 0.63
HMGCS1Q01581 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19■□□□□ 0.63
HMGCS1Q01581 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19■□□□□ 0.63
HMGCS1Q01581 GPX1P1-201ENST00000388829 606 ntBASIC19■□□□□ 0.63
HMGCS1Q01581 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
HMGCS1Q01581 BX276092.2-201ENST00000417668 665 ntBASIC19■□□□□ 0.63
HMGCS1Q01581 CROCCP5-201ENST00000436658 830 ntBASIC19■□□□□ 0.63
HMGCS1Q01581 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19■□□□□ 0.63
HMGCS1Q01581 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
HMGCS1Q01581 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19■□□□□ 0.63
HMGCS1Q01581 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
HMGCS1Q01581 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19■□□□□ 0.63
HMGCS1Q01581 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
HMGCS1Q01581 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGCS1Q01581 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19■□□□□ 0.63
HMGCS1Q01581 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGCS1Q01581 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19■□□□□ 0.63
HMGCS1Q01581 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19■□□□□ 0.63
HMGCS1Q01581 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
HMGCS1Q01581 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
HMGCS1Q01581 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19■□□□□ 0.63
HMGCS1Q01581 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19■□□□□ 0.63
HMGCS1Q01581 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19■□□□□ 0.63
HMGCS1Q01581 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCS1Q01581 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCS1Q01581 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCS1Q01581 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
HMGCS1Q01581 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
HMGCS1Q01581 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.99■□□□□ 0.63
HMGCS1Q01581 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCS1Q01581 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCS1Q01581 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCS1Q01581 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
HMGCS1Q01581 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCS1Q01581 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
HMGCS1Q01581 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.99■□□□□ 0.63
HMGCS1Q01581 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCS1Q01581 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCS1Q01581 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCS1Q01581 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
HMGCS1Q01581 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCS1Q01581 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
HMGCS1Q01581 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.98■□□□□ 0.63
HMGCS1Q01581 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
HMGCS1Q01581 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
HMGCS1Q01581 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCS1Q01581 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCS1Q01581 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCS1Q01581 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCS1Q01581 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.98■□□□□ 0.63
HMGCS1Q01581 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
HMGCS1Q01581 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.98■□□□□ 0.63
HMGCS1Q01581 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms