Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.48■□□□□ 0.87
IRX4P78413 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
IRX4P78413 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
IRX4P78413 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
IRX4P78413 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
IRX4P78413 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
IRX4P78413 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.47■□□□□ 0.87
IRX4P78413 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
IRX4P78413 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
IRX4P78413 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
IRX4P78413 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
IRX4P78413 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
IRX4P78413 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
IRX4P78413 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.47■□□□□ 0.87
IRX4P78413 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
IRX4P78413 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
IRX4P78413 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
IRX4P78413 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
IRX4P78413 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.47■□□□□ 0.87
IRX4P78413 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.47■□□□□ 0.87
IRX4P78413 BX088651.1-201ENST00000540551 451 ntBASIC20.47■□□□□ 0.87
IRX4P78413 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.47■□□□□ 0.87
IRX4P78413 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
IRX4P78413 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
IRX4P78413 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.47■□□□□ 0.87
IRX4P78413 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
IRX4P78413 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.47■□□□□ 0.87
IRX4P78413 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
IRX4P78413 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
IRX4P78413 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
IRX4P78413 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.46■□□□□ 0.87
IRX4P78413 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
IRX4P78413 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
IRX4P78413 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
IRX4P78413 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
IRX4P78413 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.46■□□□□ 0.87
IRX4P78413 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
IRX4P78413 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
IRX4P78413 AIRN-201ENST00000601203 4374 ntBASIC20.46■□□□□ 0.87
IRX4P78413 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
IRX4P78413 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
IRX4P78413 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
IRX4P78413 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
IRX4P78413 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.46■□□□□ 0.87
IRX4P78413 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
IRX4P78413 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
IRX4P78413 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.46■□□□□ 0.87
IRX4P78413 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
IRX4P78413 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.46■□□□□ 0.87
IRX4P78413 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
IRX4P78413 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
IRX4P78413 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
IRX4P78413 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.45■□□□□ 0.86
IRX4P78413 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.45■□□□□ 0.86
IRX4P78413 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
IRX4P78413 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
IRX4P78413 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
IRX4P78413 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.45■□□□□ 0.86
IRX4P78413 POM121L13P-201ENST00000422362 380 ntBASIC20.45■□□□□ 0.86
IRX4P78413 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.45■□□□□ 0.86
IRX4P78413 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
IRX4P78413 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
IRX4P78413 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
IRX4P78413 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
IRX4P78413 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
IRX4P78413 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.44■□□□□ 0.86
IRX4P78413 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
IRX4P78413 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
IRX4P78413 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
IRX4P78413 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
IRX4P78413 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
IRX4P78413 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
IRX4P78413 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.44■□□□□ 0.86
IRX4P78413 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.44■□□□□ 0.86
IRX4P78413 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.44■□□□□ 0.86
IRX4P78413 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.44■□□□□ 0.86
IRX4P78413 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.44■□□□□ 0.86
IRX4P78413 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
IRX4P78413 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
IRX4P78413 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.44■□□□□ 0.86
IRX4P78413 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
IRX4P78413 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
IRX4P78413 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
IRX4P78413 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
IRX4P78413 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
IRX4P78413 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
IRX4P78413 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
IRX4P78413 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
IRX4P78413 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
IRX4P78413 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
IRX4P78413 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
IRX4P78413 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.43■□□□□ 0.86
IRX4P78413 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.43■□□□□ 0.86
IRX4P78413 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.43■□□□□ 0.86
IRX4P78413 TSPY7P-201ENST00000431358 1114 ntBASIC20.43■□□□□ 0.86
IRX4P78413 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.43■□□□□ 0.86
IRX4P78413 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.43■□□□□ 0.86
IRX4P78413 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.43■□□□□ 0.86
IRX4P78413 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.43■□□□□ 0.86
IRX4P78413 AC233702.5-201ENST00000584107 538 ntBASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms