Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 AL138781.1-201ENST00000566567 1274 ntBASIC17.36■□□□□ 0.37
LSM6P62312 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.36■□□□□ 0.37
LSM6P62312 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.36■□□□□ 0.37
LSM6P62312 AC133041.1-202ENST00000642053 222 ntBASIC17.36■□□□□ 0.37
LSM6P62312 AC007952.6-201ENST00000573168 2673 ntBASIC17.36■□□□□ 0.37
LSM6P62312 AC003957.1-201ENST00000625108 2673 ntBASIC17.36■□□□□ 0.37
LSM6P62312 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.36■□□□□ 0.37
LSM6P62312 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.36■□□□□ 0.37
LSM6P62312 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSM6P62312 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSM6P62312 AC018553.1-201ENST00000616682 1458 ntBASIC17.36■□□□□ 0.37
LSM6P62312 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSM6P62312 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSM6P62312 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.36■□□□□ 0.37
LSM6P62312 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.36■□□□□ 0.37
LSM6P62312 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LSM6P62312 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSM6P62312 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LSM6P62312 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSM6P62312 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LSM6P62312 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.35■□□□□ 0.37
LSM6P62312 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSM6P62312 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LSM6P62312 AL158211.5-201ENST00000623583 2518 ntBASIC17.35■□□□□ 0.37
LSM6P62312 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSM6P62312 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSM6P62312 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSM6P62312 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.35■□□□□ 0.37
LSM6P62312 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSM6P62312 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.35■□□□□ 0.37
LSM6P62312 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LSM6P62312 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LSM6P62312 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.35■□□□□ 0.37
LSM6P62312 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.35■□□□□ 0.37
LSM6P62312 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.35■□□□□ 0.37
LSM6P62312 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSM6P62312 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LSM6P62312 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.35■□□□□ 0.37
LSM6P62312 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.35■□□□□ 0.37
LSM6P62312 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.35■□□□□ 0.37
LSM6P62312 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSM6P62312 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.35■□□□□ 0.37
LSM6P62312 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSM6P62312 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSM6P62312 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.34■□□□□ 0.37
LSM6P62312 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
LSM6P62312 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.34■□□□□ 0.37
LSM6P62312 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LSM6P62312 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LSM6P62312 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LSM6P62312 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LSM6P62312 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LSM6P62312 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.34■□□□□ 0.37
LSM6P62312 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
LSM6P62312 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
LSM6P62312 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LSM6P62312 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.34■□□□□ 0.37
LSM6P62312 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.34■□□□□ 0.37
LSM6P62312 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.34■□□□□ 0.37
LSM6P62312 AC090192.1-201ENST00000517740 490 ntBASIC17.34■□□□□ 0.37
LSM6P62312 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LSM6P62312 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LSM6P62312 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.34■□□□□ 0.37
LSM6P62312 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
LSM6P62312 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.34■□□□□ 0.37
LSM6P62312 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.34■□□□□ 0.37
LSM6P62312 AC060766.5-201ENST00000590539 871 ntBASIC17.34■□□□□ 0.37
LSM6P62312 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.34■□□□□ 0.37
LSM6P62312 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.34■□□□□ 0.37
LSM6P62312 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.34■□□□□ 0.37
LSM6P62312 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LSM6P62312 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LSM6P62312 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LSM6P62312 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.33■□□□□ 0.37
LSM6P62312 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.33■□□□□ 0.37
LSM6P62312 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LSM6P62312 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LSM6P62312 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LSM6P62312 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LSM6P62312 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LSM6P62312 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
LSM6P62312 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LSM6P62312 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
LSM6P62312 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
LSM6P62312 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
LSM6P62312 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LSM6P62312 AC092368.3-202ENST00000574180 1591 ntBASIC17.33■□□□□ 0.37
LSM6P62312 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.33■□□□□ 0.37
LSM6P62312 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.33■□□□□ 0.36
LSM6P62312 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LSM6P62312 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LSM6P62312 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.33■□□□□ 0.36
LSM6P62312 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.33■□□□□ 0.36
LSM6P62312 AC142086.2-201ENST00000569753 217 ntBASIC17.33■□□□□ 0.36
LSM6P62312 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LSM6P62312 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LSM6P62312 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.33■□□□□ 0.36
LSM6P62312 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.33■□□□□ 0.36
LSM6P62312 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LSM6P62312 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms