Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.5■□□□□ 0.71
SRP54P61011 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SRP54P61011 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SRP54P61011 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SRP54P61011 SMG8-203ENST00000578922 2178 ntBASIC19.5■□□□□ 0.71
SRP54P61011 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
SRP54P61011 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.5■□□□□ 0.71
SRP54P61011 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SRP54P61011 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SRP54P61011 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SRP54P61011 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SRP54P61011 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SRP54P61011 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SRP54P61011 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.49■□□□□ 0.71
SRP54P61011 AC073912.3-201ENST00000624414 853 ntBASIC19.49■□□□□ 0.71
SRP54P61011 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
SRP54P61011 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
SRP54P61011 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SRP54P61011 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SRP54P61011 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SRP54P61011 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SRP54P61011 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
SRP54P61011 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.49■□□□□ 0.71
SRP54P61011 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SRP54P61011 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SRP54P61011 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SRP54P61011 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SRP54P61011 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SRP54P61011 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.48■□□□□ 0.71
SRP54P61011 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SRP54P61011 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SRP54P61011 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SRP54P61011 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SRP54P61011 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SRP54P61011 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SRP54P61011 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.48■□□□□ 0.71
SRP54P61011 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
SRP54P61011 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SRP54P61011 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.48■□□□□ 0.71
SRP54P61011 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
SRP54P61011 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SRP54P61011 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SRP54P61011 AC116351.2-201ENST00000606540 1585 ntBASIC19.48■□□□□ 0.71
SRP54P61011 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SRP54P61011 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SRP54P61011 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SRP54P61011 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.48■□□□□ 0.71
SRP54P61011 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SRP54P61011 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.48■□□□□ 0.71
SRP54P61011 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRP54P61011 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SRP54P61011 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRP54P61011 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
SRP54P61011 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRP54P61011 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SRP54P61011 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.47■□□□□ 0.71
SRP54P61011 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SRP54P61011 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.47■□□□□ 0.71
SRP54P61011 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.47■□□□□ 0.71
SRP54P61011 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.47■□□□□ 0.71
SRP54P61011 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.47■□□□□ 0.71
SRP54P61011 CD177P1-201ENST00000606252 935 ntBASIC19.47■□□□□ 0.71
SRP54P61011 REXO1L12P-201ENST00000622156 912 ntBASIC19.47■□□□□ 0.71
SRP54P61011 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.47■□□□□ 0.71
SRP54P61011 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRP54P61011 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRP54P61011 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRP54P61011 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRP54P61011 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SRP54P61011 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRP54P61011 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRP54P61011 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.47■□□□□ 0.71
SRP54P61011 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SRP54P61011 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SRP54P61011 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SRP54P61011 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SRP54P61011 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SRP54P61011 AP006587.1-201ENST00000534129 1502 ntBASIC19.46■□□□□ 0.71
SRP54P61011 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SRP54P61011 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.46■□□□□ 0.71
SRP54P61011 AP002982.1-201ENST00000492365 877 ntBASIC19.46■□□□□ 0.71
SRP54P61011 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.46■□□□□ 0.71
SRP54P61011 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.46■□□□□ 0.71
SRP54P61011 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.46■□□□□ 0.71
SRP54P61011 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SRP54P61011 AC073195.1-201ENST00000607241 877 ntBASIC19.46■□□□□ 0.71
SRP54P61011 AC026471.5-201ENST00000615068 467 ntBASIC19.46■□□□□ 0.71
SRP54P61011 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SRP54P61011 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.46■□□□□ 0.71
SRP54P61011 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SRP54P61011 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.46■□□□□ 0.71
SRP54P61011 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SRP54P61011 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SRP54P61011 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SRP54P61011 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.45■□□□□ 0.7
SRP54P61011 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
SRP54P61011 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SRP54P61011 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SRP54P61011 FAM197Y1-201ENST00000421178 764 ntBASIC19.45■□□□□ 0.7
SRP54P61011 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms