Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN2P57739 NIFKP9-201ENST00000419265 221 ntBASIC19.55■□□□□ 0.72
CLDN2P57739 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CLDN2P57739 KRT18P21-201ENST00000515767 1272 ntBASIC19.55■□□□□ 0.72
CLDN2P57739 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.55■□□□□ 0.72
CLDN2P57739 REXO1L10P-201ENST00000615707 1290 ntBASIC19.55■□□□□ 0.72
CLDN2P57739 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN2P57739 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN2P57739 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN2P57739 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN2P57739 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN2P57739 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CLDN2P57739 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.54■□□□□ 0.72
CLDN2P57739 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN2P57739 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.54■□□□□ 0.72
CLDN2P57739 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.54■□□□□ 0.72
CLDN2P57739 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CLDN2P57739 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
CLDN2P57739 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN2P57739 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.54■□□□□ 0.72
CLDN2P57739 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN2P57739 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN2P57739 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN2P57739 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN2P57739 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CLDN2P57739 PHGDH-210ENST00000641115 1638 ntBASIC19.54■□□□□ 0.72
CLDN2P57739 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN2P57739 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CLDN2P57739 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN2P57739 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN2P57739 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.53■□□□□ 0.72
CLDN2P57739 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN2P57739 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN2P57739 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN2P57739 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN2P57739 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN2P57739 KSR1P1-201ENST00000446298 240 ntBASIC19.53■□□□□ 0.72
CLDN2P57739 RBM17P1-201ENST00000453646 1190 ntBASIC19.53■□□□□ 0.72
CLDN2P57739 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN2P57739 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.53■□□□□ 0.72
CLDN2P57739 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.53■□□□□ 0.72
CLDN2P57739 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.53■□□□□ 0.72
CLDN2P57739 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.53■□□□□ 0.72
CLDN2P57739 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN2P57739 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN2P57739 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.53■□□□□ 0.72
CLDN2P57739 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN2P57739 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN2P57739 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN2P57739 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.53■□□□□ 0.72
CLDN2P57739 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN2P57739 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN2P57739 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.52■□□□□ 0.72
CLDN2P57739 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN2P57739 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CLDN2P57739 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CLDN2P57739 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.52■□□□□ 0.72
CLDN2P57739 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN2P57739 MMP23A-201ENST00000234610 1017 ntBASIC19.52■□□□□ 0.72
CLDN2P57739 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.52■□□□□ 0.72
CLDN2P57739 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN2P57739 FAM210CP-201ENST00000445714 574 ntBASIC19.52■□□□□ 0.72
CLDN2P57739 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN2P57739 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.52■□□□□ 0.72
CLDN2P57739 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.52■□□□□ 0.72
CLDN2P57739 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.52■□□□□ 0.72
CLDN2P57739 AP000525.1-201ENST00000608286 694 ntBASIC19.52■□□□□ 0.72
CLDN2P57739 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.52■□□□□ 0.72
CLDN2P57739 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN2P57739 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN2P57739 AC079598.2-202ENST00000546624 1451 ntBASIC19.52■□□□□ 0.72
CLDN2P57739 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN2P57739 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
CLDN2P57739 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLDN2P57739 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.52■□□□□ 0.71
CLDN2P57739 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLDN2P57739 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.52■□□□□ 0.71
CLDN2P57739 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.52■□□□□ 0.71
CLDN2P57739 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CLDN2P57739 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN2P57739 KRT16P1-201ENST00000399124 1418 ntBASIC19.51■□□□□ 0.71
CLDN2P57739 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN2P57739 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN2P57739 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CLDN2P57739 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN2P57739 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.51■□□□□ 0.71
CLDN2P57739 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.51■□□□□ 0.71
CLDN2P57739 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CLDN2P57739 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN2P57739 C1QL1P1-201ENST00000568105 661 ntBASIC19.51■□□□□ 0.71
CLDN2P57739 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.51■□□□□ 0.71
CLDN2P57739 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN2P57739 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN2P57739 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN2P57739 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN2P57739 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN2P57739 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CLDN2P57739 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.51■□□□□ 0.71
CLDN2P57739 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN2P57739 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms