Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.34■□□□□ 0.21
RIPPLY3P57055 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RIPPLY3P57055 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RIPPLY3P57055 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RIPPLY3P57055 MIR574-201ENST00000385209 96 ntBASIC16.34■□□□□ 0.21
RIPPLY3P57055 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RIPPLY3P57055 AC007322.3-201ENST00000426526 701 ntBASIC16.34■□□□□ 0.21
RIPPLY3P57055 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.34■□□□□ 0.21
RIPPLY3P57055 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.34■□□□□ 0.21
RIPPLY3P57055 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.34■□□□□ 0.21
RIPPLY3P57055 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.34■□□□□ 0.21
RIPPLY3P57055 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.34■□□□□ 0.21
RIPPLY3P57055 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.34■□□□□ 0.21
RIPPLY3P57055 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RIPPLY3P57055 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RIPPLY3P57055 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RIPPLY3P57055 GALC-202ENST00000393568 2054 ntTSL 2 BASIC16.34■□□□□ 0.21
RIPPLY3P57055 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.34■□□□□ 0.21
RIPPLY3P57055 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC16.34■□□□□ 0.21
RIPPLY3P57055 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RIPPLY3P57055 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC16.34■□□□□ 0.21
RIPPLY3P57055 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RIPPLY3P57055 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RIPPLY3P57055 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
RIPPLY3P57055 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RIPPLY3P57055 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC16.33■□□□□ 0.21
RIPPLY3P57055 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RIPPLY3P57055 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RIPPLY3P57055 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RIPPLY3P57055 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.33■□□□□ 0.2
RIPPLY3P57055 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.33■□□□□ 0.2
RIPPLY3P57055 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RIPPLY3P57055 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RIPPLY3P57055 EMBP1-201ENST00000458200 901 ntBASIC16.33■□□□□ 0.2
RIPPLY3P57055 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.33■□□□□ 0.2
RIPPLY3P57055 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.33■□□□□ 0.2
RIPPLY3P57055 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.33■□□□□ 0.2
RIPPLY3P57055 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.33■□□□□ 0.2
RIPPLY3P57055 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
RIPPLY3P57055 SLC25A6P4-201ENST00000586535 553 ntBASIC16.33■□□□□ 0.2
RIPPLY3P57055 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.33■□□□□ 0.2
RIPPLY3P57055 AC140113.2-201ENST00000604370 208 ntBASIC16.33■□□□□ 0.2
RIPPLY3P57055 AL390719.2-201ENST00000606993 987 ntBASIC16.33■□□□□ 0.2
RIPPLY3P57055 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.33■□□□□ 0.2
RIPPLY3P57055 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
RIPPLY3P57055 AC116562.4-202ENST00000641738 218 ntBASIC16.33■□□□□ 0.2
RIPPLY3P57055 AL031985.4-201ENST00000642138 673 ntBASIC16.33■□□□□ 0.2
RIPPLY3P57055 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.33■□□□□ 0.2
RIPPLY3P57055 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RIPPLY3P57055 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RIPPLY3P57055 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RIPPLY3P57055 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RIPPLY3P57055 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RIPPLY3P57055 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.32■□□□□ 0.2
RIPPLY3P57055 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RIPPLY3P57055 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RIPPLY3P57055 INGX-201ENST00000359239 846 ntBASIC16.32■□□□□ 0.2
RIPPLY3P57055 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
RIPPLY3P57055 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.32■□□□□ 0.2
RIPPLY3P57055 AL590627.1-203ENST00000421194 1026 ntBASIC16.32■□□□□ 0.2
RIPPLY3P57055 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.32■□□□□ 0.2
RIPPLY3P57055 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC16.32■□□□□ 0.2
RIPPLY3P57055 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
RIPPLY3P57055 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.32■□□□□ 0.2
RIPPLY3P57055 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.32■□□□□ 0.2
RIPPLY3P57055 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RIPPLY3P57055 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.32■□□□□ 0.2
RIPPLY3P57055 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RIPPLY3P57055 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RIPPLY3P57055 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RIPPLY3P57055 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RIPPLY3P57055 LINC01711-201ENST00000598340 967 ntBASIC16.32■□□□□ 0.2
RIPPLY3P57055 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC16.32■□□□□ 0.2
RIPPLY3P57055 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RIPPLY3P57055 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RIPPLY3P57055 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC16.31■□□□□ 0.2
RIPPLY3P57055 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RIPPLY3P57055 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RIPPLY3P57055 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RIPPLY3P57055 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RIPPLY3P57055 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.31■□□□□ 0.2
RIPPLY3P57055 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.31■□□□□ 0.2
RIPPLY3P57055 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RIPPLY3P57055 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RIPPLY3P57055 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
RIPPLY3P57055 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.31■□□□□ 0.2
RIPPLY3P57055 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.31■□□□□ 0.2
RIPPLY3P57055 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.31■□□□□ 0.2
RIPPLY3P57055 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RIPPLY3P57055 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.31■□□□□ 0.2
RIPPLY3P57055 AL512604.3-201ENST00000569583 964 ntBASIC16.31■□□□□ 0.2
RIPPLY3P57055 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.31■□□□□ 0.2
RIPPLY3P57055 AC140113.3-201ENST00000605663 199 ntBASIC16.31■□□□□ 0.2
RIPPLY3P57055 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RIPPLY3P57055 PALM-208ENST00000592155 2272 ntTSL 4 BASIC16.31■□□□□ 0.2
RIPPLY3P57055 AC233723.2-201ENST00000623798 2106 ntBASIC16.31■□□□□ 0.2
RIPPLY3P57055 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RIPPLY3P57055 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RIPPLY3P57055 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RIPPLY3P57055 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms