Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN12P56749 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN12P56749 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CLDN12P56749 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN12P56749 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CLDN12P56749 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CLDN12P56749 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN12P56749 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
CLDN12P56749 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CLDN12P56749 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.16■□□□□ 0.34
CLDN12P56749 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN12P56749 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN12P56749 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CLDN12P56749 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN12P56749 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN12P56749 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CLDN12P56749 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN12P56749 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN12P56749 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN12P56749 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
CLDN12P56749 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN12P56749 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN12P56749 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN12P56749 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CLDN12P56749 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN12P56749 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN12P56749 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDN12P56749 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CLDN12P56749 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CLDN12P56749 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN12P56749 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CLDN12P56749 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN12P56749 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CLDN12P56749 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN12P56749 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
CLDN12P56749 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.15■□□□□ 0.34
CLDN12P56749 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.15■□□□□ 0.34
CLDN12P56749 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDN12P56749 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.15■□□□□ 0.34
CLDN12P56749 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDN12P56749 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDN12P56749 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDN12P56749 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.15■□□□□ 0.34
CLDN12P56749 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN12P56749 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN12P56749 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN12P56749 LINC01465-201ENST00000408887 1940 ntBASIC17.15■□□□□ 0.34
CLDN12P56749 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN12P56749 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN12P56749 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN12P56749 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDN12P56749 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN12P56749 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN12P56749 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
CLDN12P56749 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CLDN12P56749 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDN12P56749 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN12P56749 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN12P56749 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CLDN12P56749 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CLDN12P56749 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN12P56749 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CLDN12P56749 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN12P56749 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.14■□□□□ 0.33
CLDN12P56749 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN12P56749 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CLDN12P56749 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN12P56749 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.14■□□□□ 0.33
CLDN12P56749 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.14■□□□□ 0.33
CLDN12P56749 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.14■□□□□ 0.33
CLDN12P56749 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.14■□□□□ 0.33
CLDN12P56749 SUDS3P1-201ENST00000505831 966 ntBASIC17.14■□□□□ 0.33
CLDN12P56749 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.14■□□□□ 0.33
CLDN12P56749 AL356652.1-201ENST00000615962 565 ntBASIC17.14■□□□□ 0.33
CLDN12P56749 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CLDN12P56749 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.14■□□□□ 0.33
CLDN12P56749 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.14■□□□□ 0.33
CLDN12P56749 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CLDN12P56749 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN12P56749 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CLDN12P56749 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN12P56749 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
CLDN12P56749 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN12P56749 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
CLDN12P56749 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN12P56749 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN12P56749 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.14■□□□□ 0.33
CLDN12P56749 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN12P56749 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN12P56749 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN12P56749 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN12P56749 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN12P56749 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
CLDN12P56749 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CLDN12P56749 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN12P56749 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.13■□□□□ 0.33
CLDN12P56749 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.13■□□□□ 0.33
CLDN12P56749 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.13■□□□□ 0.33
CLDN12P56749 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.13■□□□□ 0.33
CLDN12P56749 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms