Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.67■□□□□ 0.58
NR1H2P55055 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NR1H2P55055 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.67■□□□□ 0.58
NR1H2P55055 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.67■□□□□ 0.58
NR1H2P55055 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.67■□□□□ 0.58
NR1H2P55055 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NR1H2P55055 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NR1H2P55055 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
NR1H2P55055 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NR1H2P55055 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NR1H2P55055 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NR1H2P55055 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.67■□□□□ 0.58
NR1H2P55055 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.67■□□□□ 0.58
NR1H2P55055 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NR1H2P55055 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.67■□□□□ 0.58
NR1H2P55055 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NR1H2P55055 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NR1H2P55055 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NR1H2P55055 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NR1H2P55055 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NR1H2P55055 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.67■□□□□ 0.58
NR1H2P55055 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NR1H2P55055 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
NR1H2P55055 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NR1H2P55055 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NR1H2P55055 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.66■□□□□ 0.58
NR1H2P55055 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
NR1H2P55055 AC026185.1-201ENST00000445748 174 ntBASIC18.66■□□□□ 0.58
NR1H2P55055 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
NR1H2P55055 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.66■□□□□ 0.58
NR1H2P55055 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.66■□□□□ 0.58
NR1H2P55055 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.66■□□□□ 0.58
NR1H2P55055 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.66■□□□□ 0.58
NR1H2P55055 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
NR1H2P55055 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NR1H2P55055 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.66■□□□□ 0.58
NR1H2P55055 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.66■□□□□ 0.58
NR1H2P55055 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NR1H2P55055 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NR1H2P55055 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NR1H2P55055 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
NR1H2P55055 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NR1H2P55055 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
NR1H2P55055 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.65■□□□□ 0.58
NR1H2P55055 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NR1H2P55055 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
NR1H2P55055 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
NR1H2P55055 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NR1H2P55055 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.65■□□□□ 0.58
NR1H2P55055 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NR1H2P55055 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NR1H2P55055 TMEM179-206ENST00000616017 1645 ntBASIC18.65■□□□□ 0.58
NR1H2P55055 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NR1H2P55055 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
NR1H2P55055 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NR1H2P55055 CDCA4P2-201ENST00000441182 718 ntBASIC18.65■□□□□ 0.58
NR1H2P55055 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.65■□□□□ 0.58
NR1H2P55055 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.65■□□□□ 0.58
NR1H2P55055 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.65■□□□□ 0.58
NR1H2P55055 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.65■□□□□ 0.58
NR1H2P55055 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NR1H2P55055 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.65■□□□□ 0.58
NR1H2P55055 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NR1H2P55055 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NR1H2P55055 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NR1H2P55055 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NR1H2P55055 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.65■□□□□ 0.58
NR1H2P55055 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
NR1H2P55055 AL032819.2-201ENST00000624543 2162 ntBASIC18.65■□□□□ 0.58
NR1H2P55055 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
NR1H2P55055 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NR1H2P55055 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NR1H2P55055 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NR1H2P55055 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NR1H2P55055 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NR1H2P55055 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NR1H2P55055 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NR1H2P55055 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.58
NR1H2P55055 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
NR1H2P55055 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
NR1H2P55055 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.64■□□□□ 0.57
NR1H2P55055 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NR1H2P55055 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NR1H2P55055 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NR1H2P55055 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NR1H2P55055 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NR1H2P55055 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NR1H2P55055 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.64■□□□□ 0.57
NR1H2P55055 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.64■□□□□ 0.57
NR1H2P55055 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NR1H2P55055 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.64■□□□□ 0.57
NR1H2P55055 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NR1H2P55055 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NR1H2P55055 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NR1H2P55055 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
NR1H2P55055 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NR1H2P55055 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.63■□□□□ 0.57
NR1H2P55055 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NR1H2P55055 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
NR1H2P55055 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms