Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
EPHA4P54764 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
EPHA4P54764 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
EPHA4P54764 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
EPHA4P54764 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.05■□□□□ 0.64
EPHA4P54764 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
EPHA4P54764 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
EPHA4P54764 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.05■□□□□ 0.64
EPHA4P54764 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.05■□□□□ 0.64
EPHA4P54764 NUDT16P1-203ENST00000513809 620 ntBASIC19.05■□□□□ 0.64
EPHA4P54764 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.05■□□□□ 0.64
EPHA4P54764 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.05■□□□□ 0.64
EPHA4P54764 C1QL1P1-201ENST00000568105 661 ntBASIC19.05■□□□□ 0.64
EPHA4P54764 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
EPHA4P54764 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
EPHA4P54764 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
EPHA4P54764 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
EPHA4P54764 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
EPHA4P54764 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
EPHA4P54764 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.05■□□□□ 0.64
EPHA4P54764 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
EPHA4P54764 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
EPHA4P54764 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
EPHA4P54764 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
EPHA4P54764 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.05■□□□□ 0.64
EPHA4P54764 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
EPHA4P54764 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.05■□□□□ 0.64
EPHA4P54764 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
EPHA4P54764 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
EPHA4P54764 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
EPHA4P54764 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EPHA4P54764 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EPHA4P54764 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EPHA4P54764 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
EPHA4P54764 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
EPHA4P54764 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EPHA4P54764 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
EPHA4P54764 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.04■□□□□ 0.64
EPHA4P54764 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.04■□□□□ 0.64
EPHA4P54764 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EPHA4P54764 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.04■□□□□ 0.64
EPHA4P54764 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
EPHA4P54764 KRT18P16-201ENST00000510337 1294 ntBASIC19.04■□□□□ 0.64
EPHA4P54764 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.04■□□□□ 0.64
EPHA4P54764 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
EPHA4P54764 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.04■□□□□ 0.64
EPHA4P54764 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
EPHA4P54764 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.04■□□□□ 0.64
EPHA4P54764 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.04■□□□□ 0.64
EPHA4P54764 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.04■□□□□ 0.64
EPHA4P54764 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.04■□□□□ 0.64
EPHA4P54764 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.04■□□□□ 0.64
EPHA4P54764 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
EPHA4P54764 PKD1P6-201ENST00000343738 4769 ntBASIC19.04■□□□□ 0.64
EPHA4P54764 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.04■□□□□ 0.64
EPHA4P54764 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
EPHA4P54764 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.04■□□□□ 0.64
EPHA4P54764 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
EPHA4P54764 SMG8-203ENST00000578922 2178 ntBASIC19.03■□□□□ 0.64
EPHA4P54764 BX119927.1-201ENST00000636596 1552 ntBASIC19.03■□□□□ 0.64
EPHA4P54764 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
EPHA4P54764 KRT16P1-201ENST00000399124 1418 ntBASIC19.03■□□□□ 0.64
EPHA4P54764 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
EPHA4P54764 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
EPHA4P54764 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.03■□□□□ 0.64
EPHA4P54764 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.03■□□□□ 0.64
EPHA4P54764 LINC01023-201ENST00000606054 436 ntBASIC19.03■□□□□ 0.64
EPHA4P54764 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.03■□□□□ 0.64
EPHA4P54764 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
EPHA4P54764 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
EPHA4P54764 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
EPHA4P54764 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
EPHA4P54764 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.03■□□□□ 0.64
EPHA4P54764 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
EPHA4P54764 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
EPHA4P54764 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
EPHA4P54764 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.03■□□□□ 0.64
EPHA4P54764 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
EPHA4P54764 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.02■□□□□ 0.64
EPHA4P54764 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
EPHA4P54764 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
EPHA4P54764 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
EPHA4P54764 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.02■□□□□ 0.64
EPHA4P54764 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
EPHA4P54764 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
EPHA4P54764 TUBB8P6-201ENST00000436895 1288 ntBASIC19.02■□□□□ 0.64
EPHA4P54764 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.02■□□□□ 0.64
EPHA4P54764 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
EPHA4P54764 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
EPHA4P54764 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
EPHA4P54764 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
EPHA4P54764 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
EPHA4P54764 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
EPHA4P54764 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
EPHA4P54764 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
EPHA4P54764 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.01■□□□□ 0.63
EPHA4P54764 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
EPHA4P54764 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
EPHA4P54764 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.01■□□□□ 0.63
EPHA4P54764 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms