Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CACNA2D1P54289 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CACNA2D1P54289 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CACNA2D1P54289 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CACNA2D1P54289 KRT16P6-202ENST00000425692 1426 ntBASIC20.95■□□□□ 0.94
CACNA2D1P54289 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CACNA2D1P54289 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CACNA2D1P54289 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CACNA2D1P54289 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
CACNA2D1P54289 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.94■□□□□ 0.94
CACNA2D1P54289 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
CACNA2D1P54289 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.94■□□□□ 0.94
CACNA2D1P54289 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CACNA2D1P54289 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.94■□□□□ 0.94
CACNA2D1P54289 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CACNA2D1P54289 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.94■□□□□ 0.94
CACNA2D1P54289 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CACNA2D1P54289 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
CACNA2D1P54289 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CACNA2D1P54289 Z99916.2-201ENST00000604037 246 ntBASIC20.94■□□□□ 0.94
CACNA2D1P54289 AC110285.5-201ENST00000611501 352 ntBASIC20.94■□□□□ 0.94
CACNA2D1P54289 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.94■□□□□ 0.94
CACNA2D1P54289 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CACNA2D1P54289 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CACNA2D1P54289 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CACNA2D1P54289 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CACNA2D1P54289 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
CACNA2D1P54289 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.93■□□□□ 0.94
CACNA2D1P54289 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CACNA2D1P54289 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CACNA2D1P54289 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CACNA2D1P54289 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.93■□□□□ 0.94
CACNA2D1P54289 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CACNA2D1P54289 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
CACNA2D1P54289 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CACNA2D1P54289 PRKY-204ENST00000533551 1019 ntBASIC20.93■□□□□ 0.94
CACNA2D1P54289 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.93■□□□□ 0.94
CACNA2D1P54289 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CACNA2D1P54289 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.93■□□□□ 0.94
CACNA2D1P54289 AP006294.2-201ENST00000641667 209 ntBASIC20.93■□□□□ 0.94
CACNA2D1P54289 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.93■□□□□ 0.94
CACNA2D1P54289 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
CACNA2D1P54289 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.93■□□□□ 0.94
CACNA2D1P54289 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.92■□□□□ 0.94
CACNA2D1P54289 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.92■□□□□ 0.94
CACNA2D1P54289 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CACNA2D1P54289 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CACNA2D1P54289 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CACNA2D1P54289 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.92■□□□□ 0.94
CACNA2D1P54289 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CACNA2D1P54289 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.92■□□□□ 0.94
CACNA2D1P54289 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CACNA2D1P54289 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CACNA2D1P54289 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CACNA2D1P54289 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CACNA2D1P54289 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.92■□□□□ 0.94
CACNA2D1P54289 AL596275.1-201ENST00000423464 877 ntBASIC20.92■□□□□ 0.94
CACNA2D1P54289 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CACNA2D1P54289 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.92■□□□□ 0.94
CACNA2D1P54289 RPS2P4-201ENST00000476944 856 ntBASIC20.92■□□□□ 0.94
CACNA2D1P54289 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CACNA2D1P54289 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.92■□□□□ 0.94
CACNA2D1P54289 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CACNA2D1P54289 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CACNA2D1P54289 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CACNA2D1P54289 AC018553.1-201ENST00000616682 1458 ntBASIC20.92■□□□□ 0.94
CACNA2D1P54289 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CACNA2D1P54289 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CACNA2D1P54289 AC116351.2-201ENST00000606540 1585 ntBASIC20.92■□□□□ 0.94
CACNA2D1P54289 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CACNA2D1P54289 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CACNA2D1P54289 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CACNA2D1P54289 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.92■□□□□ 0.94
CACNA2D1P54289 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.92■□□□□ 0.94
CACNA2D1P54289 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CACNA2D1P54289 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CACNA2D1P54289 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CACNA2D1P54289 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CACNA2D1P54289 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CACNA2D1P54289 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CACNA2D1P54289 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CACNA2D1P54289 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CACNA2D1P54289 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CACNA2D1P54289 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CACNA2D1P54289 NBPF21P-201ENST00000425093 1451 ntBASIC20.91■□□□□ 0.94
CACNA2D1P54289 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.91■□□□□ 0.94
CACNA2D1P54289 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CACNA2D1P54289 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.91■□□□□ 0.94
CACNA2D1P54289 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.91■□□□□ 0.94
CACNA2D1P54289 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.91■□□□□ 0.94
CACNA2D1P54289 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.91■□□□□ 0.94
CACNA2D1P54289 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CACNA2D1P54289 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CACNA2D1P54289 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CACNA2D1P54289 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CACNA2D1P54289 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.9■□□□□ 0.94
CACNA2D1P54289 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.9■□□□□ 0.94
CACNA2D1P54289 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CACNA2D1P54289 AL691432.2-201ENST00000607222 2038 ntBASIC20.9■□□□□ 0.94
CACNA2D1P54289 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms