Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUBP1P53384 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
NUBP1P53384 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NUBP1P53384 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.74■□□□□ 0.75
NUBP1P53384 NEK4P2-201ENST00000580004 1012 ntBASIC19.74■□□□□ 0.75
NUBP1P53384 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.74■□□□□ 0.75
NUBP1P53384 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
NUBP1P53384 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUBP1P53384 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.74■□□□□ 0.75
NUBP1P53384 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUBP1P53384 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUBP1P53384 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUBP1P53384 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.74■□□□□ 0.75
NUBP1P53384 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.74■□□□□ 0.75
NUBP1P53384 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NUBP1P53384 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
NUBP1P53384 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NUBP1P53384 NUS1P1-201ENST00000446295 882 ntBASIC19.73■□□□□ 0.75
NUBP1P53384 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.73■□□□□ 0.75
NUBP1P53384 EMC4-208ENST00000559078 599 ntTSL 3 BASIC19.73■□□□□ 0.75
NUBP1P53384 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.73■□□□□ 0.75
NUBP1P53384 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
NUBP1P53384 AL158211.2-201ENST00000607282 395 ntBASIC19.73■□□□□ 0.75
NUBP1P53384 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NUBP1P53384 HYMAI.1-201ENST00000620949 238 ntBASIC19.73■□□□□ 0.75
NUBP1P53384 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.73■□□□□ 0.75
NUBP1P53384 MIR2861-201ENST00000636310 90 ntBASIC19.73■□□□□ 0.75
NUBP1P53384 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.73■□□□□ 0.75
NUBP1P53384 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
NUBP1P53384 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NUBP1P53384 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NUBP1P53384 LINC01311-201ENST00000565162 1445 ntBASIC19.73■□□□□ 0.75
NUBP1P53384 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.73■□□□□ 0.75
NUBP1P53384 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NUBP1P53384 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.73■□□□□ 0.75
NUBP1P53384 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.73■□□□□ 0.75
NUBP1P53384 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUBP1P53384 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NUBP1P53384 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUBP1P53384 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.72■□□□□ 0.75
NUBP1P53384 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NUBP1P53384 AC092119.3-201ENST00000612618 583 ntBASIC19.72■□□□□ 0.75
NUBP1P53384 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUBP1P53384 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
NUBP1P53384 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.71■□□□□ 0.75
NUBP1P53384 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
NUBP1P53384 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.71■□□□□ 0.75
NUBP1P53384 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
NUBP1P53384 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.71■□□□□ 0.75
NUBP1P53384 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NUBP1P53384 AL603841.1-201ENST00000430516 664 ntBASIC19.71■□□□□ 0.75
NUBP1P53384 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.71■□□□□ 0.75
NUBP1P53384 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.71■□□□□ 0.75
NUBP1P53384 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.71■□□□□ 0.75
NUBP1P53384 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.71■□□□□ 0.75
NUBP1P53384 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.71■□□□□ 0.75
NUBP1P53384 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
NUBP1P53384 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
NUBP1P53384 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.71■□□□□ 0.75
NUBP1P53384 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NUBP1P53384 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
NUBP1P53384 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.7■□□□□ 0.74
NUBP1P53384 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NUBP1P53384 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NUBP1P53384 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.7■□□□□ 0.74
NUBP1P53384 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
NUBP1P53384 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NUBP1P53384 IFNA1-201ENST00000276927 863 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
NUBP1P53384 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NUBP1P53384 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NUBP1P53384 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NUBP1P53384 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NUBP1P53384 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NUBP1P53384 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.7■□□□□ 0.74
NUBP1P53384 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NUBP1P53384 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NUBP1P53384 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
NUBP1P53384 PTBP1P-201ENST00000554374 1601 ntBASIC19.69■□□□□ 0.74
NUBP1P53384 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NUBP1P53384 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NUBP1P53384 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NUBP1P53384 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.69■□□□□ 0.74
NUBP1P53384 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.69■□□□□ 0.74
NUBP1P53384 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NUBP1P53384 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.69■□□□□ 0.74
NUBP1P53384 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.69■□□□□ 0.74
NUBP1P53384 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC19.69■□□□□ 0.74
NUBP1P53384 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.69■□□□□ 0.74
NUBP1P53384 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.69■□□□□ 0.74
NUBP1P53384 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
NUBP1P53384 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.69■□□□□ 0.74
NUBP1P53384 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NUBP1P53384 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.69■□□□□ 0.74
NUBP1P53384 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.69■□□□□ 0.74
NUBP1P53384 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NUBP1P53384 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
NUBP1P53384 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NUBP1P53384 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.69■□□□□ 0.74
NUBP1P53384 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUBP1P53384 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms