Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCR9P51686 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCR9P51686 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCR9P51686 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCR9P51686 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCR9P51686 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
CCR9P51686 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CCR9P51686 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCR9P51686 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCR9P51686 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCR9P51686 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCR9P51686 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCR9P51686 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCR9P51686 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCR9P51686 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.37■□□□□ 0.37
CCR9P51686 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCR9P51686 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCR9P51686 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCR9P51686 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCR9P51686 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCR9P51686 KRT18P11-201ENST00000435214 1283 ntBASIC17.37■□□□□ 0.37
CCR9P51686 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
CCR9P51686 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.37■□□□□ 0.37
CCR9P51686 AC016405.3-201ENST00000607710 860 ntBASIC17.37■□□□□ 0.37
CCR9P51686 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CCR9P51686 LETM1P2-201ENST00000597330 2178 ntBASIC17.37■□□□□ 0.37
CCR9P51686 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCR9P51686 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCR9P51686 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCR9P51686 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCR9P51686 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCR9P51686 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.37■□□□□ 0.37
CCR9P51686 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCR9P51686 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.37■□□□□ 0.37
CCR9P51686 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCR9P51686 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCR9P51686 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCR9P51686 NEFHP1-201ENST00000412845 2629 ntBASIC17.36■□□□□ 0.37
CCR9P51686 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCR9P51686 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.36■□□□□ 0.37
CCR9P51686 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCR9P51686 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.36■□□□□ 0.37
CCR9P51686 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCR9P51686 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCR9P51686 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCR9P51686 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCR9P51686 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCR9P51686 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCR9P51686 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCR9P51686 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCR9P51686 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCR9P51686 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCR9P51686 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCR9P51686 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CCR9P51686 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCR9P51686 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CCR9P51686 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCR9P51686 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCR9P51686 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCR9P51686 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
CCR9P51686 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCR9P51686 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCR9P51686 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCR9P51686 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.36■□□□□ 0.37
CCR9P51686 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CCR9P51686 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
CCR9P51686 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCR9P51686 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.35■□□□□ 0.37
CCR9P51686 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCR9P51686 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCR9P51686 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCR9P51686 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCR9P51686 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCR9P51686 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.35■□□□□ 0.37
CCR9P51686 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.35■□□□□ 0.37
CCR9P51686 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.35■□□□□ 0.37
CCR9P51686 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCR9P51686 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCR9P51686 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCR9P51686 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCR9P51686 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.35■□□□□ 0.37
CCR9P51686 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCR9P51686 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCR9P51686 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCR9P51686 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCR9P51686 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CCR9P51686 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCR9P51686 AC093503.3-201ENST00000624917 2352 ntBASIC17.35■□□□□ 0.37
CCR9P51686 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCR9P51686 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCR9P51686 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CCR9P51686 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCR9P51686 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.34■□□□□ 0.37
CCR9P51686 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCR9P51686 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.34■□□□□ 0.37
CCR9P51686 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCR9P51686 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCR9P51686 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCR9P51686 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCR9P51686 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms