Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CPT1AP50416 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
CPT1AP50416 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.96■■□□□ 1.11
CPT1AP50416 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CPT1AP50416 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
CPT1AP50416 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
CPT1AP50416 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CPT1AP50416 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.96■■□□□ 1.11
CPT1AP50416 DUX4L26-201ENST00000489078 1255 ntBASIC21.96■■□□□ 1.11
CPT1AP50416 AC010203.1-204ENST00000548782 407 ntBASIC21.96■■□□□ 1.11
CPT1AP50416 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
CPT1AP50416 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.96■■□□□ 1.11
CPT1AP50416 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CPT1AP50416 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CPT1AP50416 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CPT1AP50416 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.96■■□□□ 1.11
CPT1AP50416 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CPT1AP50416 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
CPT1AP50416 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPT1AP50416 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPT1AP50416 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
CPT1AP50416 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPT1AP50416 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.95■■□□□ 1.1
CPT1AP50416 ECEL1P2-202ENST00000465689 757 ntBASIC21.95■■□□□ 1.1
CPT1AP50416 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPT1AP50416 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CPT1AP50416 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPT1AP50416 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.95■■□□□ 1.1
CPT1AP50416 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPT1AP50416 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPT1AP50416 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPT1AP50416 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CPT1AP50416 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPT1AP50416 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.94■■□□□ 1.1
CPT1AP50416 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPT1AP50416 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.94■■□□□ 1.1
CPT1AP50416 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CPT1AP50416 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPT1AP50416 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.94■■□□□ 1.1
CPT1AP50416 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CPT1AP50416 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPT1AP50416 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPT1AP50416 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPT1AP50416 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPT1AP50416 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.94■■□□□ 1.1
CPT1AP50416 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.94■■□□□ 1.1
CPT1AP50416 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.94■■□□□ 1.1
CPT1AP50416 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPT1AP50416 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPT1AP50416 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CPT1AP50416 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.94■■□□□ 1.1
CPT1AP50416 SLC25A1P4-201ENST00000567977 778 ntBASIC21.94■■□□□ 1.1
CPT1AP50416 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CPT1AP50416 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CPT1AP50416 AC130371.2-201ENST00000619443 611 ntBASIC21.94■■□□□ 1.1
CPT1AP50416 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPT1AP50416 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPT1AP50416 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPT1AP50416 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPT1AP50416 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CPT1AP50416 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CPT1AP50416 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.94■■□□□ 1.1
CPT1AP50416 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CPT1AP50416 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CPT1AP50416 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CPT1AP50416 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CPT1AP50416 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CPT1AP50416 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.93■■□□□ 1.1
CPT1AP50416 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CPT1AP50416 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CPT1AP50416 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CPT1AP50416 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CPT1AP50416 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CPT1AP50416 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CPT1AP50416 AC104076.2-201ENST00000448912 469 ntBASIC21.93■■□□□ 1.1
CPT1AP50416 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.93■■□□□ 1.1
CPT1AP50416 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CPT1AP50416 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.93■■□□□ 1.1
CPT1AP50416 RCC2P6-201ENST00000526625 1557 ntBASIC21.93■■□□□ 1.1
CPT1AP50416 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.93■■□□□ 1.1
CPT1AP50416 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CPT1AP50416 AP000692.2-201ENST00000608391 879 ntBASIC21.93■■□□□ 1.1
CPT1AP50416 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPT1AP50416 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPT1AP50416 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPT1AP50416 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPT1AP50416 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPT1AP50416 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CPT1AP50416 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.92■■□□□ 1.1
CPT1AP50416 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
CPT1AP50416 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPT1AP50416 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.92■■□□□ 1.1
CPT1AP50416 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.92■■□□□ 1.1
CPT1AP50416 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CPT1AP50416 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPT1AP50416 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPT1AP50416 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.92■■□□□ 1.1
CPT1AP50416 AC011298.2-201ENST00000617989 482 ntBASIC21.92■■□□□ 1.1
CPT1AP50416 HLA-A-209ENST00000638375 975 ntBASIC21.92■■□□□ 1.1
CPT1AP50416 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms