Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.58■□□□□ 0.4
CSNK1A1P48729 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.58■□□□□ 0.4
CSNK1A1P48729 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.58■□□□□ 0.4
CSNK1A1P48729 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CSNK1A1P48729 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CSNK1A1P48729 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.58■□□□□ 0.4
CSNK1A1P48729 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CSNK1A1P48729 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CSNK1A1P48729 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.58■□□□□ 0.4
CSNK1A1P48729 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CSNK1A1P48729 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.58■□□□□ 0.4
CSNK1A1P48729 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CSNK1A1P48729 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CSNK1A1P48729 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSNK1A1P48729 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.57■□□□□ 0.4
CSNK1A1P48729 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CSNK1A1P48729 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CSNK1A1P48729 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CSNK1A1P48729 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CSNK1A1P48729 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.57■□□□□ 0.4
CSNK1A1P48729 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.57■□□□□ 0.4
CSNK1A1P48729 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.57■□□□□ 0.4
CSNK1A1P48729 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.57■□□□□ 0.4
CSNK1A1P48729 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.57■□□□□ 0.4
CSNK1A1P48729 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CSNK1A1P48729 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.57■□□□□ 0.4
CSNK1A1P48729 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.57■□□□□ 0.4
CSNK1A1P48729 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSNK1A1P48729 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CSNK1A1P48729 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSNK1A1P48729 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.57■□□□□ 0.4
CSNK1A1P48729 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.57■□□□□ 0.4
CSNK1A1P48729 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSNK1A1P48729 AC009237.14-201ENST00000609975 1594 ntBASIC17.57■□□□□ 0.4
CSNK1A1P48729 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSNK1A1P48729 AFG3L1P-217ENST00000557444 2447 ntBASIC17.57■□□□□ 0.4
CSNK1A1P48729 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CSNK1A1P48729 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSNK1A1P48729 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.56■□□□□ 0.4
CSNK1A1P48729 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CSNK1A1P48729 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSNK1A1P48729 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSNK1A1P48729 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSNK1A1P48729 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSNK1A1P48729 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSNK1A1P48729 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSNK1A1P48729 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.56■□□□□ 0.4
CSNK1A1P48729 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CSNK1A1P48729 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSNK1A1P48729 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.56■□□□□ 0.4
CSNK1A1P48729 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.56■□□□□ 0.4
CSNK1A1P48729 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.56■□□□□ 0.4
CSNK1A1P48729 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.56■□□□□ 0.4
CSNK1A1P48729 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.56■□□□□ 0.4
CSNK1A1P48729 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
CSNK1A1P48729 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CSNK1A1P48729 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CSNK1A1P48729 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSNK1A1P48729 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CSNK1A1P48729 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSNK1A1P48729 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CSNK1A1P48729 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.56■□□□□ 0.4
CSNK1A1P48729 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.56■□□□□ 0.4
CSNK1A1P48729 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CSNK1A1P48729 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CSNK1A1P48729 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CSNK1A1P48729 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CSNK1A1P48729 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.56■□□□□ 0.4
CSNK1A1P48729 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CSNK1A1P48729 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CSNK1A1P48729 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.55■□□□□ 0.4
CSNK1A1P48729 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSNK1A1P48729 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CSNK1A1P48729 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSNK1A1P48729 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSNK1A1P48729 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSNK1A1P48729 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.55■□□□□ 0.4
CSNK1A1P48729 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.55■□□□□ 0.4
CSNK1A1P48729 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.55■□□□□ 0.4
CSNK1A1P48729 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSNK1A1P48729 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.55■□□□□ 0.4
CSNK1A1P48729 SOX15-203ENST00000570788 1093 ntBASIC17.55■□□□□ 0.4
CSNK1A1P48729 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.55■□□□□ 0.4
CSNK1A1P48729 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.55■□□□□ 0.4
CSNK1A1P48729 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.55■□□□□ 0.4
CSNK1A1P48729 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CSNK1A1P48729 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CSNK1A1P48729 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CSNK1A1P48729 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.55■□□□□ 0.4
CSNK1A1P48729 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CSNK1A1P48729 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
CSNK1A1P48729 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSNK1A1P48729 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CSNK1A1P48729 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CSNK1A1P48729 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSNK1A1P48729 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSNK1A1P48729 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSNK1A1P48729 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSNK1A1P48729 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSNK1A1P48729 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms