Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.13■□□□□ 0.65
KRT6CP48668 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
KRT6CP48668 AC073111.5-205ENST00000641717 521 ntBASIC19.13■□□□□ 0.65
KRT6CP48668 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT6CP48668 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT6CP48668 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT6CP48668 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KRT6CP48668 AC116562.4-201ENST00000641316 2276 ntBASIC19.13■□□□□ 0.65
KRT6CP48668 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.13■□□□□ 0.65
KRT6CP48668 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT6CP48668 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
KRT6CP48668 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KRT6CP48668 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT6CP48668 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT6CP48668 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT6CP48668 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KRT6CP48668 PHGDH-210ENST00000641115 1638 ntBASIC19.12■□□□□ 0.65
KRT6CP48668 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT6CP48668 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KRT6CP48668 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.12■□□□□ 0.65
KRT6CP48668 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.12■□□□□ 0.65
KRT6CP48668 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KRT6CP48668 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.12■□□□□ 0.65
KRT6CP48668 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.12■□□□□ 0.65
KRT6CP48668 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.12■□□□□ 0.65
KRT6CP48668 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.12■□□□□ 0.65
KRT6CP48668 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.12■□□□□ 0.65
KRT6CP48668 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.12■□□□□ 0.65
KRT6CP48668 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT6CP48668 AL137784.2-201ENST00000607332 1000 ntBASIC19.12■□□□□ 0.65
KRT6CP48668 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.12■□□□□ 0.65
KRT6CP48668 AC092437.1-201ENST00000624794 1048 ntBASIC19.12■□□□□ 0.65
KRT6CP48668 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.12■□□□□ 0.65
KRT6CP48668 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.12■□□□□ 0.65
KRT6CP48668 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT6CP48668 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT6CP48668 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT6CP48668 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT6CP48668 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.12■□□□□ 0.65
KRT6CP48668 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT6CP48668 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.11■□□□□ 0.65
KRT6CP48668 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT6CP48668 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT6CP48668 MKRN4P-201ENST00000444706 1521 ntBASIC19.11■□□□□ 0.65
KRT6CP48668 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KRT6CP48668 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT6CP48668 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KRT6CP48668 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
KRT6CP48668 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.11■□□□□ 0.65
KRT6CP48668 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.11■□□□□ 0.65
KRT6CP48668 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT6CP48668 AF201337.1-201ENST00000520239 748 ntBASIC19.11■□□□□ 0.65
KRT6CP48668 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KRT6CP48668 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
KRT6CP48668 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.11■□□□□ 0.65
KRT6CP48668 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT6CP48668 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT6CP48668 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KRT6CP48668 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT6CP48668 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
KRT6CP48668 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT6CP48668 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.11■□□□□ 0.65
KRT6CP48668 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
KRT6CP48668 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT6CP48668 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT6CP48668 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KRT6CP48668 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
KRT6CP48668 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.1■□□□□ 0.65
KRT6CP48668 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KRT6CP48668 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
KRT6CP48668 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT6CP48668 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT6CP48668 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT6CP48668 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.1■□□□□ 0.65
KRT6CP48668 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.1■□□□□ 0.65
KRT6CP48668 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.1■□□□□ 0.65
KRT6CP48668 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.1■□□□□ 0.65
KRT6CP48668 AC105036.2-201ENST00000569468 176 ntBASIC19.1■□□□□ 0.65
KRT6CP48668 IKBKGP1-201ENST00000612193 1073 ntBASIC19.1■□□□□ 0.65
KRT6CP48668 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT6CP48668 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.1■□□□□ 0.65
KRT6CP48668 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT6CP48668 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT6CP48668 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
KRT6CP48668 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KRT6CP48668 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.1■□□□□ 0.65
KRT6CP48668 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KRT6CP48668 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.1■□□□□ 0.65
KRT6CP48668 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT6CP48668 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.1■□□□□ 0.65
KRT6CP48668 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.09■□□□□ 0.65
KRT6CP48668 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT6CP48668 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT6CP48668 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
KRT6CP48668 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
KRT6CP48668 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT6CP48668 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT6CP48668 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT6CP48668 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
KRT6CP48668 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms