Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.71■□□□□ 0.91
MTHFRP42898 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
MTHFRP42898 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MTHFRP42898 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.71■□□□□ 0.91
MTHFRP42898 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MTHFRP42898 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.71■□□□□ 0.91
MTHFRP42898 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
MTHFRP42898 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.71■□□□□ 0.91
MTHFRP42898 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
MTHFRP42898 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.71■□□□□ 0.91
MTHFRP42898 AC097488.1-201ENST00000507834 756 ntBASIC20.71■□□□□ 0.91
MTHFRP42898 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.71■□□□□ 0.91
MTHFRP42898 AC091076.1-201ENST00000610741 619 ntBASIC20.71■□□□□ 0.91
MTHFRP42898 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.71■□□□□ 0.91
MTHFRP42898 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MTHFRP42898 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MTHFRP42898 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MTHFRP42898 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.7■□□□□ 0.9
MTHFRP42898 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
MTHFRP42898 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
MTHFRP42898 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MTHFRP42898 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
MTHFRP42898 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.7■□□□□ 0.9
MTHFRP42898 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MTHFRP42898 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
MTHFRP42898 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
MTHFRP42898 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.7■□□□□ 0.9
MTHFRP42898 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
MTHFRP42898 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.7■□□□□ 0.9
MTHFRP42898 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.7■□□□□ 0.9
MTHFRP42898 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.7■□□□□ 0.9
MTHFRP42898 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.7■□□□□ 0.9
MTHFRP42898 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MTHFRP42898 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MTHFRP42898 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.7■□□□□ 0.9
MTHFRP42898 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MTHFRP42898 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.69■□□□□ 0.9
MTHFRP42898 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.69■□□□□ 0.9
MTHFRP42898 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
MTHFRP42898 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
MTHFRP42898 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
MTHFRP42898 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
MTHFRP42898 CRYGFP-201ENST00000418459 633 ntBASIC20.69■□□□□ 0.9
MTHFRP42898 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.69■□□□□ 0.9
MTHFRP42898 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.69■□□□□ 0.9
MTHFRP42898 AC022616.7-201ENST00000525383 220 ntBASIC20.69■□□□□ 0.9
MTHFRP42898 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MTHFRP42898 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.69■□□□□ 0.9
MTHFRP42898 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MTHFRP42898 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MTHFRP42898 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.69■□□□□ 0.9
MTHFRP42898 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
MTHFRP42898 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
MTHFRP42898 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
MTHFRP42898 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
MTHFRP42898 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MTHFRP42898 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MTHFRP42898 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
MTHFRP42898 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
MTHFRP42898 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.68■□□□□ 0.9
MTHFRP42898 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MTHFRP42898 UPK3BP1-201ENST00000428678 509 ntBASIC20.68■□□□□ 0.9
MTHFRP42898 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.68■□□□□ 0.9
MTHFRP42898 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MTHFRP42898 AC131212.4-201ENST00000623606 975 ntBASIC20.68■□□□□ 0.9
MTHFRP42898 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MTHFRP42898 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MTHFRP42898 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MTHFRP42898 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
MTHFRP42898 KRT8P17-201ENST00000453110 1448 ntBASIC20.68■□□□□ 0.9
MTHFRP42898 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
MTHFRP42898 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MTHFRP42898 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MTHFRP42898 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MTHFRP42898 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MTHFRP42898 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
MTHFRP42898 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.67■□□□□ 0.9
MTHFRP42898 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MTHFRP42898 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
MTHFRP42898 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MTHFRP42898 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.67■□□□□ 0.9
MTHFRP42898 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.67■□□□□ 0.9
MTHFRP42898 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.67■□□□□ 0.9
MTHFRP42898 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.67■□□□□ 0.9
MTHFRP42898 AC011506.1-201ENST00000474329 610 ntBASIC20.67■□□□□ 0.9
MTHFRP42898 AC063952.2-201ENST00000498792 1227 ntBASIC20.67■□□□□ 0.9
MTHFRP42898 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.67■□□□□ 0.9
MTHFRP42898 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
MTHFRP42898 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MTHFRP42898 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MTHFRP42898 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MTHFRP42898 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.67■□□□□ 0.9
MTHFRP42898 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.67■□□□□ 0.9
MTHFRP42898 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
MTHFRP42898 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MTHFRP42898 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.67■□□□□ 0.9
MTHFRP42898 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
MTHFRP42898 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MTHFRP42898 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.66■□□□□ 0.9
MTHFRP42898 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms