Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC35.22■■■■□ 3.23
NCAPD3P42695 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC35.22■■■■□ 3.23
NCAPD3P42695 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC35.22■■■■□ 3.23
NCAPD3P42695 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
NCAPD3P42695 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC35.21■■■■□ 3.23
NCAPD3P42695 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC35.21■■■■□ 3.23
NCAPD3P42695 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC35.21■■■■□ 3.23
NCAPD3P42695 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC35.21■■■■□ 3.23
NCAPD3P42695 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC35.21■■■■□ 3.23
NCAPD3P42695 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
NCAPD3P42695 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC35.21■■■■□ 3.23
NCAPD3P42695 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC35.21■■■■□ 3.23
NCAPD3P42695 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
NCAPD3P42695 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC35.2■■■■□ 3.23
NCAPD3P42695 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC35.2■■■■□ 3.23
NCAPD3P42695 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC35.2■■■■□ 3.23
NCAPD3P42695 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC35.2■■■■□ 3.23
NCAPD3P42695 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC35.2■■■■□ 3.23
NCAPD3P42695 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC35.2■■■■□ 3.23
NCAPD3P42695 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC35.2■■■■□ 3.23
NCAPD3P42695 AC004263.2-201ENST00000617183 678 ntBASIC35.2■■■■□ 3.23
NCAPD3P42695 CR769767.2-201ENST00000622735 460 ntBASIC35.2■■■■□ 3.23
NCAPD3P42695 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
NCAPD3P42695 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC35.19■■■■□ 3.22
NCAPD3P42695 AC018553.1-201ENST00000616682 1458 ntBASIC35.19■■■■□ 3.22
NCAPD3P42695 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC35.19■■■■□ 3.22
NCAPD3P42695 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC35.19■■■■□ 3.22
NCAPD3P42695 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC35.19■■■■□ 3.22
NCAPD3P42695 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC35.19■■■■□ 3.22
NCAPD3P42695 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC35.19■■■■□ 3.22
NCAPD3P42695 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC35.19■■■■□ 3.22
NCAPD3P42695 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
NCAPD3P42695 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC35.18■■■■□ 3.22
NCAPD3P42695 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC35.18■■■■□ 3.22
NCAPD3P42695 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC35.18■■■■□ 3.22
NCAPD3P42695 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
NCAPD3P42695 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
NCAPD3P42695 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
NCAPD3P42695 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC35.18■■■■□ 3.22
NCAPD3P42695 SKP2-204ENST00000508514 821 ntTSL 3 BASIC35.18■■■■□ 3.22
NCAPD3P42695 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC35.18■■■■□ 3.22
NCAPD3P42695 KLK8-205ENST00000593490 267 ntTSL 3 BASIC35.18■■■■□ 3.22
NCAPD3P42695 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC35.18■■■■□ 3.22
NCAPD3P42695 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC35.18■■■■□ 3.22
NCAPD3P42695 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
NCAPD3P42695 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
NCAPD3P42695 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
NCAPD3P42695 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC35.17■■■■□ 3.22
NCAPD3P42695 STARP1-201ENST00000397973 869 ntBASIC35.17■■■■□ 3.22
NCAPD3P42695 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC35.17■■■■□ 3.22
NCAPD3P42695 BCL10-202ENST00000620248 774 ntTSL 5 BASIC35.17■■■■□ 3.22
NCAPD3P42695 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC35.17■■■■□ 3.22
NCAPD3P42695 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC35.17■■■■□ 3.22
NCAPD3P42695 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC35.17■■■■□ 3.22
NCAPD3P42695 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC35.17■■■■□ 3.22
NCAPD3P42695 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC35.17■■■■□ 3.22
NCAPD3P42695 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC35.17■■■■□ 3.22
NCAPD3P42695 AC242852.2-201ENST00000615738 1807 ntBASIC35.17■■■■□ 3.22
NCAPD3P42695 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
NCAPD3P42695 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
NCAPD3P42695 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC35.16■■■■□ 3.22
NCAPD3P42695 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC35.16■■■■□ 3.22
NCAPD3P42695 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
NCAPD3P42695 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC35.16■■■■□ 3.22
NCAPD3P42695 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC35.16■■■■□ 3.22
NCAPD3P42695 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC35.16■■■■□ 3.22
NCAPD3P42695 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC35.16■■■■□ 3.22
NCAPD3P42695 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
NCAPD3P42695 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC35.16■■■■□ 3.22
NCAPD3P42695 TUB-203ENST00000534099 1759 ntTSL 2 BASIC35.16■■■■□ 3.22
NCAPD3P42695 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
NCAPD3P42695 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC35.16■■■■□ 3.22
NCAPD3P42695 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC35.16■■■■□ 3.22
NCAPD3P42695 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC35.16■■■■□ 3.22
NCAPD3P42695 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC35.16■■■■□ 3.22
NCAPD3P42695 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC35.15■■■■□ 3.22
NCAPD3P42695 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC35.15■■■■□ 3.22
NCAPD3P42695 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC35.15■■■■□ 3.22
NCAPD3P42695 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC35.15■■■■□ 3.22
NCAPD3P42695 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC35.15■■■■□ 3.22
NCAPD3P42695 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
NCAPD3P42695 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC35.15■■■■□ 3.22
NCAPD3P42695 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC35.15■■■■□ 3.22
NCAPD3P42695 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC35.15■■■■□ 3.22
NCAPD3P42695 SDHD-206ENST00000528182 754 ntTSL 3 BASIC35.15■■■■□ 3.22
NCAPD3P42695 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC35.15■■■■□ 3.22
NCAPD3P42695 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC35.15■■■■□ 3.22
NCAPD3P42695 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
NCAPD3P42695 KRT8P10-201ENST00000450021 1447 ntBASIC35.14■■■■□ 3.22
NCAPD3P42695 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC35.14■■■■□ 3.22
NCAPD3P42695 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC35.14■■■■□ 3.22
NCAPD3P42695 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
NCAPD3P42695 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC35.14■■■■□ 3.22
NCAPD3P42695 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC35.14■■■■□ 3.22
NCAPD3P42695 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC35.14■■■■□ 3.22
NCAPD3P42695 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC35.14■■■■□ 3.22
NCAPD3P42695 AC006538.3-201ENST00000612495 578 ntBASIC35.14■■■■□ 3.22
NCAPD3P42695 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC35.14■■■■□ 3.22
NCAPD3P42695 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC35.13■■■■□ 3.22
NCAPD3P42695 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC35.13■■■■□ 3.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms