Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RFC5P40937 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RFC5P40937 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RFC5P40937 KRT18P16-201ENST00000510337 1294 ntBASIC21.83■■□□□ 1.09
RFC5P40937 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.83■■□□□ 1.09
RFC5P40937 MIR4497-201ENST00000583208 89 ntBASIC21.83■■□□□ 1.09
RFC5P40937 AF186192.3-201ENST00000583427 947 ntBASIC21.83■■□□□ 1.09
RFC5P40937 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.83■■□□□ 1.09
RFC5P40937 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.83■■□□□ 1.09
RFC5P40937 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RFC5P40937 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RFC5P40937 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
RFC5P40937 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RFC5P40937 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
RFC5P40937 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
RFC5P40937 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
RFC5P40937 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.82■■□□□ 1.08
RFC5P40937 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFC5P40937 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RFC5P40937 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFC5P40937 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RFC5P40937 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RFC5P40937 RNF165-205ENST00000588679 2904 ntBASIC21.82■■□□□ 1.08
RFC5P40937 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
RFC5P40937 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.82■■□□□ 1.08
RFC5P40937 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFC5P40937 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RFC5P40937 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.82■■□□□ 1.08
RFC5P40937 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.82■■□□□ 1.08
RFC5P40937 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.82■■□□□ 1.08
RFC5P40937 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RFC5P40937 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.82■■□□□ 1.08
RFC5P40937 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFC5P40937 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RFC5P40937 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RFC5P40937 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
RFC5P40937 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFC5P40937 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.82■■□□□ 1.08
RFC5P40937 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.81■■□□□ 1.08
RFC5P40937 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
RFC5P40937 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.81■■□□□ 1.08
RFC5P40937 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
RFC5P40937 SNORA78-201ENST00000459373 127 ntBASIC21.81■■□□□ 1.08
RFC5P40937 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RFC5P40937 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.81■■□□□ 1.08
RFC5P40937 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.81■■□□□ 1.08
RFC5P40937 AL353708.3-201ENST00000610272 989 ntBASIC21.81■■□□□ 1.08
RFC5P40937 AC113410.3-201ENST00000623366 203 ntBASIC21.81■■□□□ 1.08
RFC5P40937 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.81■■□□□ 1.08
RFC5P40937 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFC5P40937 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFC5P40937 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RFC5P40937 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
RFC5P40937 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFC5P40937 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
RFC5P40937 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.8■■□□□ 1.08
RFC5P40937 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RFC5P40937 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
RFC5P40937 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.8■■□□□ 1.08
RFC5P40937 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.8■■□□□ 1.08
RFC5P40937 LINC01006-201ENST00000333319 2292 ntBASIC21.8■■□□□ 1.08
RFC5P40937 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RFC5P40937 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFC5P40937 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFC5P40937 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFC5P40937 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFC5P40937 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFC5P40937 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.8■■□□□ 1.08
RFC5P40937 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFC5P40937 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFC5P40937 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.8■■□□□ 1.08
RFC5P40937 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.8■■□□□ 1.08
RFC5P40937 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFC5P40937 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFC5P40937 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RFC5P40937 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFC5P40937 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFC5P40937 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFC5P40937 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFC5P40937 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.8■■□□□ 1.08
RFC5P40937 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.8■■□□□ 1.08
RFC5P40937 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.8■■□□□ 1.08
RFC5P40937 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RFC5P40937 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFC5P40937 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFC5P40937 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
RFC5P40937 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
RFC5P40937 TUBB8P6-201ENST00000436895 1288 ntBASIC21.79■■□□□ 1.08
RFC5P40937 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
RFC5P40937 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.79■■□□□ 1.08
RFC5P40937 AP002982.1-201ENST00000492365 877 ntBASIC21.79■■□□□ 1.08
RFC5P40937 C1QL1P1-201ENST00000568105 661 ntBASIC21.79■■□□□ 1.08
RFC5P40937 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.79■■□□□ 1.08
RFC5P40937 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFC5P40937 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
RFC5P40937 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.79■■□□□ 1.08
RFC5P40937 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFC5P40937 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
RFC5P40937 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFC5P40937 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms