Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.77■□□□□ 0.92
PCK1P35558 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCK1P35558 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCK1P35558 AC125437.2-201ENST00000625180 2167 ntBASIC20.77■□□□□ 0.92
PCK1P35558 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCK1P35558 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
PCK1P35558 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCK1P35558 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
PCK1P35558 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PCK1P35558 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCK1P35558 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCK1P35558 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCK1P35558 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCK1P35558 DUSP5P2-201ENST00000426873 1033 ntBASIC20.76■□□□□ 0.91
PCK1P35558 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.76■□□□□ 0.91
PCK1P35558 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.76■□□□□ 0.91
PCK1P35558 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCK1P35558 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCK1P35558 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCK1P35558 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.76■□□□□ 0.91
PCK1P35558 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCK1P35558 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
PCK1P35558 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCK1P35558 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCK1P35558 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCK1P35558 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCK1P35558 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.75■□□□□ 0.91
PCK1P35558 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCK1P35558 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCK1P35558 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCK1P35558 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PCK1P35558 AC091874.3-201ENST00000512672 1195 ntBASIC20.75■□□□□ 0.91
PCK1P35558 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.75■□□□□ 0.91
PCK1P35558 MIR4758-201ENST00000577688 71 ntBASIC20.75■□□□□ 0.91
PCK1P35558 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCK1P35558 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.75■□□□□ 0.91
PCK1P35558 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCK1P35558 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.75■□□□□ 0.91
PCK1P35558 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
PCK1P35558 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCK1P35558 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCK1P35558 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PCK1P35558 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
PCK1P35558 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.74■□□□□ 0.91
PCK1P35558 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCK1P35558 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCK1P35558 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
PCK1P35558 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCK1P35558 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCK1P35558 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCK1P35558 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCK1P35558 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCK1P35558 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.74■□□□□ 0.91
PCK1P35558 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCK1P35558 AC073210.2-201ENST00000430369 194 ntBASIC20.74■□□□□ 0.91
PCK1P35558 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.74■□□□□ 0.91
PCK1P35558 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.74■□□□□ 0.91
PCK1P35558 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.74■□□□□ 0.91
PCK1P35558 AP001271.2-201ENST00000624018 1556 ntBASIC20.74■□□□□ 0.91
PCK1P35558 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
PCK1P35558 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCK1P35558 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCK1P35558 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.74■□□□□ 0.91
PCK1P35558 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.74■□□□□ 0.91
PCK1P35558 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.74■□□□□ 0.91
PCK1P35558 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCK1P35558 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCK1P35558 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.73■□□□□ 0.91
PCK1P35558 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
PCK1P35558 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.73■□□□□ 0.91
PCK1P35558 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCK1P35558 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PCK1P35558 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.73■□□□□ 0.91
PCK1P35558 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PCK1P35558 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.73■□□□□ 0.91
PCK1P35558 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.73■□□□□ 0.91
PCK1P35558 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.73■□□□□ 0.91
PCK1P35558 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.73■□□□□ 0.91
PCK1P35558 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.73■□□□□ 0.91
PCK1P35558 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.73■□□□□ 0.91
PCK1P35558 AL020996.1-203ENST00000536896 2307 ntBASIC20.73■□□□□ 0.91
PCK1P35558 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.73■□□□□ 0.91
PCK1P35558 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCK1P35558 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCK1P35558 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCK1P35558 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCK1P35558 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCK1P35558 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCK1P35558 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
PCK1P35558 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCK1P35558 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCK1P35558 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCK1P35558 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.72■□□□□ 0.91
PCK1P35558 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.72■□□□□ 0.91
PCK1P35558 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCK1P35558 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCK1P35558 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.72■□□□□ 0.91
PCK1P35558 MYC-209ENST00000641252 345 ntBASIC20.72■□□□□ 0.91
PCK1P35558 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCK1P35558 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms