Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC15.03■□□□□ -0
HLA-DMBP28068 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC15.03■□□□□ -0
HLA-DMBP28068 GCK-205ENST00000437084 1385 ntTSL 5 BASIC15.03■□□□□ -0
HLA-DMBP28068 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DMBP28068 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DMBP28068 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
HLA-DMBP28068 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC15.03■□□□□ -0
HLA-DMBP28068 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC15.03■□□□□ -0
HLA-DMBP28068 CYP2T1P-201ENST00000432607 1285 ntBASIC15.03■□□□□ -0
HLA-DMBP28068 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC15.03■□□□□ -0
HLA-DMBP28068 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC15.03■□□□□ -0
HLA-DMBP28068 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC15.03■□□□□ -0
HLA-DMBP28068 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC15.03■□□□□ -0
HLA-DMBP28068 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
HLA-DMBP28068 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC15.03■□□□□ -0
HLA-DMBP28068 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
HLA-DMBP28068 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
HLA-DMBP28068 AC105020.6-201ENST00000621523 1217 ntBASIC15.03■□□□□ -0
HLA-DMBP28068 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DMBP28068 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC15.03■□□□□ -0
HLA-DMBP28068 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DMBP28068 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DMBP28068 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DMBP28068 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC15.02■□□□□ -0
HLA-DMBP28068 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC15.02■□□□□ -0
HLA-DMBP28068 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.02■□□□□ -0
HLA-DMBP28068 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DMBP28068 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.02■□□□□ -0
HLA-DMBP28068 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
HLA-DMBP28068 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.02■□□□□ -0
HLA-DMBP28068 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC15.02■□□□□ -0
HLA-DMBP28068 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DMBP28068 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DMBP28068 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DMBP28068 KRT18P68-201ENST00000392293 1000 ntBASIC15.02■□□□□ -0
HLA-DMBP28068 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC15.02■□□□□ -0
HLA-DMBP28068 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC15.02■□□□□ -0
HLA-DMBP28068 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC15.02■□□□□ -0
HLA-DMBP28068 AC005181.1-201ENST00000604782 1256 ntBASIC15.02■□□□□ -0
HLA-DMBP28068 WT1-AS_3.1-201ENST00000613262 234 ntBASIC15.02■□□□□ -0
HLA-DMBP28068 AL109923.1-201ENST00000618799 583 ntBASIC15.02■□□□□ -0
HLA-DMBP28068 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DMBP28068 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DMBP28068 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DMBP28068 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DMBP28068 GOLGA2P11-201ENST00000562660 1621 ntBASIC15.02□□□□□ -0.01
HLA-DMBP28068 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DMBP28068 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
HLA-DMBP28068 AC005332.7-201ENST00000614046 2005 ntBASIC15.02□□□□□ -0.01
HLA-DMBP28068 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC15.02□□□□□ -0.01
HLA-DMBP28068 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
HLA-DMBP28068 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC15.02□□□□□ -0.01
HLA-DMBP28068 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.02□□□□□ -0.01
HLA-DMBP28068 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC15.02□□□□□ -0.01
HLA-DMBP28068 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DMBP28068 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC15.02□□□□□ -0.01
HLA-DMBP28068 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DMBP28068 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
HLA-DMBP28068 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DMBP28068 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
HLA-DMBP28068 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-DMBP28068 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-DMBP28068 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DMBP28068 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DMBP28068 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DMBP28068 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DMBP28068 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
HLA-DMBP28068 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC15.01□□□□□ -0.01
HLA-DMBP28068 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
HLA-DMBP28068 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DMBP28068 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DMBP28068 MAP2K4P1-201ENST00000438453 1195 ntBASIC15.01□□□□□ -0.01
HLA-DMBP28068 CYP2T3P-201ENST00000601990 817 ntBASIC15.01□□□□□ -0.01
HLA-DMBP28068 AL031963.3-201ENST00000606441 850 ntBASIC15.01□□□□□ -0.01
HLA-DMBP28068 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-DMBP28068 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-DMBP28068 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DMBP28068 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DMBP28068 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DMBP28068 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DMBP28068 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DMBP28068 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
HLA-DMBP28068 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DMBP28068 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DMBP28068 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-DMBP28068 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
HLA-DMBP28068 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC15□□□□□ -0.01
HLA-DMBP28068 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
HLA-DMBP28068 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC15□□□□□ -0.01
HLA-DMBP28068 AP000974.1-201ENST00000623909 2387 ntBASIC15□□□□□ -0.01
HLA-DMBP28068 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DMBP28068 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC15□□□□□ -0.01
HLA-DMBP28068 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DMBP28068 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DMBP28068 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DMBP28068 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
HLA-DMBP28068 AC018445.3-201ENST00000624177 1945 ntBASIC15□□□□□ -0.01
HLA-DMBP28068 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC15□□□□□ -0.01
HLA-DMBP28068 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DMBP28068 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms