Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CAPN3P20807 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.98■□□□□ 0.63
CAPN3P20807 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CAPN3P20807 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CAPN3P20807 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CAPN3P20807 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CAPN3P20807 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CAPN3P20807 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.98■□□□□ 0.63
CAPN3P20807 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.98■□□□□ 0.63
CAPN3P20807 AC093827.2-201ENST00000512654 315 ntBASIC18.98■□□□□ 0.63
CAPN3P20807 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.98■□□□□ 0.63
CAPN3P20807 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.98■□□□□ 0.63
CAPN3P20807 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.98■□□□□ 0.63
CAPN3P20807 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.98■□□□□ 0.63
CAPN3P20807 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CAPN3P20807 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CAPN3P20807 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CAPN3P20807 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.98■□□□□ 0.63
CAPN3P20807 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.98■□□□□ 0.63
CAPN3P20807 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
CAPN3P20807 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CAPN3P20807 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.97■□□□□ 0.63
CAPN3P20807 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CAPN3P20807 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.97■□□□□ 0.63
CAPN3P20807 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CAPN3P20807 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.97■□□□□ 0.63
CAPN3P20807 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CAPN3P20807 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CAPN3P20807 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CAPN3P20807 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CAPN3P20807 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CAPN3P20807 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.97■□□□□ 0.63
CAPN3P20807 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CAPN3P20807 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CAPN3P20807 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.97■□□□□ 0.63
CAPN3P20807 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.97■□□□□ 0.63
CAPN3P20807 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
CAPN3P20807 AC083906.2-201ENST00000511578 360 ntBASIC18.97■□□□□ 0.63
CAPN3P20807 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
CAPN3P20807 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.97■□□□□ 0.63
CAPN3P20807 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.97■□□□□ 0.63
CAPN3P20807 MYCNOS-205ENST00000641950 531 ntBASIC18.97■□□□□ 0.63
CAPN3P20807 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CAPN3P20807 AL032819.2-201ENST00000624543 2162 ntBASIC18.97■□□□□ 0.63
CAPN3P20807 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CAPN3P20807 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CAPN3P20807 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CAPN3P20807 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
CAPN3P20807 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CAPN3P20807 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CAPN3P20807 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CAPN3P20807 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CAPN3P20807 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.96■□□□□ 0.63
CAPN3P20807 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CAPN3P20807 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CAPN3P20807 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CAPN3P20807 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CAPN3P20807 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CAPN3P20807 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CAPN3P20807 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.96■□□□□ 0.63
CAPN3P20807 TSPY6P-201ENST00000448518 926 ntBASIC18.96■□□□□ 0.63
CAPN3P20807 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.96■□□□□ 0.63
CAPN3P20807 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.96■□□□□ 0.63
CAPN3P20807 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.96■□□□□ 0.63
CAPN3P20807 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CAPN3P20807 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
CAPN3P20807 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CAPN3P20807 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
CAPN3P20807 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CAPN3P20807 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CAPN3P20807 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.96■□□□□ 0.63
CAPN3P20807 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.95■□□□□ 0.62
CAPN3P20807 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN3P20807 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CAPN3P20807 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.95■□□□□ 0.62
CAPN3P20807 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.95■□□□□ 0.62
CAPN3P20807 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN3P20807 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
CAPN3P20807 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN3P20807 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN3P20807 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.95■□□□□ 0.62
CAPN3P20807 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.95■□□□□ 0.62
CAPN3P20807 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN3P20807 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CAPN3P20807 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.95■□□□□ 0.62
CAPN3P20807 KRT8P17-201ENST00000453110 1448 ntBASIC18.95■□□□□ 0.62
CAPN3P20807 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.95■□□□□ 0.62
CAPN3P20807 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN3P20807 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN3P20807 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN3P20807 AC231657.2-201ENST00000624556 255 ntBASIC18.95■□□□□ 0.62
CAPN3P20807 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN3P20807 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN3P20807 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN3P20807 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN3P20807 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN3P20807 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN3P20807 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN3P20807 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN3P20807 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms