Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
KRT4P19013 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
KRT4P19013 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT4P19013 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
KRT4P19013 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT4P19013 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT4P19013 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT4P19013 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.8■□□□□ 0.76
KRT4P19013 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KRT4P19013 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT4P19013 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KRT4P19013 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
KRT4P19013 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KRT4P19013 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KRT4P19013 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.8■□□□□ 0.76
KRT4P19013 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT4P19013 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KRT4P19013 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT4P19013 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KRT4P19013 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.8■□□□□ 0.76
KRT4P19013 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT4P19013 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
KRT4P19013 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.79■□□□□ 0.76
KRT4P19013 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT4P19013 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.79■□□□□ 0.76
KRT4P19013 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT4P19013 AP001271.2-201ENST00000624018 1556 ntBASIC19.79■□□□□ 0.76
KRT4P19013 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KRT4P19013 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT4P19013 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KRT4P19013 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
KRT4P19013 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT4P19013 KRT16P6-202ENST00000425692 1426 ntBASIC19.79■□□□□ 0.76
KRT4P19013 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT4P19013 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.79■□□□□ 0.76
KRT4P19013 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT4P19013 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT4P19013 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
KRT4P19013 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.79■□□□□ 0.76
KRT4P19013 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.79■□□□□ 0.76
KRT4P19013 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.79■□□□□ 0.76
KRT4P19013 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT4P19013 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT4P19013 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT4P19013 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT4P19013 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT4P19013 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT4P19013 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KRT4P19013 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT4P19013 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KRT4P19013 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT4P19013 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT4P19013 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KRT4P19013 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT4P19013 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KRT4P19013 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT4P19013 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT4P19013 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT4P19013 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.78■□□□□ 0.76
KRT4P19013 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KRT4P19013 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
KRT4P19013 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
KRT4P19013 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
KRT4P19013 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
KRT4P19013 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT4P19013 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT4P19013 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
KRT4P19013 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT4P19013 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT4P19013 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
KRT4P19013 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.77■□□□□ 0.76
KRT4P19013 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
KRT4P19013 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
KRT4P19013 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.77■□□□□ 0.76
KRT4P19013 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT4P19013 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.77■□□□□ 0.76
KRT4P19013 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
KRT4P19013 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.77■□□□□ 0.76
KRT4P19013 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
KRT4P19013 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT4P19013 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT4P19013 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
KRT4P19013 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
KRT4P19013 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT4P19013 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT4P19013 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.76■□□□□ 0.75
KRT4P19013 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT4P19013 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT4P19013 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT4P19013 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.76■□□□□ 0.75
KRT4P19013 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.76■□□□□ 0.75
KRT4P19013 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.76■□□□□ 0.75
KRT4P19013 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT4P19013 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT4P19013 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT4P19013 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT4P19013 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT4P19013 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
KRT4P19013 UBE2DNL-204ENST00000602536 740 ntBASIC19.76■□□□□ 0.75
KRT4P19013 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms